RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 MLLT3P42568 568 aaPredicted RBP15.42■□□□□ 0.06
UBE3B-211ENST00000539843 CSNK1DP48730 415 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 PAPOLAP51003 745 aaKnown RBP15.42■□□□□ 0.06
UBE3B-211ENST00000539843 HK3P52790 923 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 TPM4P67936 248 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 TLE3Q04726 772 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 C19orf57Q0VDD7 668 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 MTM1Q13496 603 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 NFATC4Q14934 902 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 PPP6R3Q5H9R7 873 aaPredicted RBP15.42■□□□□ 0.06
UBE3B-211ENST00000539843 TMCO4Q5TGY1 634 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 RD3Q7Z3Z2 195 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 SRLQ86TD4 932 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 FNIP1Q8TF40 1166 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 NSMCE1Q8WV22 266 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 CRELD1Q96HD1 420 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 NAF1Q96HR8 494 aaKnown RBP15.42■□□□□ 0.06
UBE3B-211ENST00000539843 DPH1Q9BZG8 443 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 EDEM3Q9BZQ6 932 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 KLC2Q9H0B6 622 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 LRRC19Q9H756 370 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 PDFQ9HBH1 243 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 MBNL1Q9NR56 388 aaKnown RBP15.42■□□□□ 0.06
UBE3B-211ENST00000539843 GULP1Q9UBP9 304 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 PCSK1NQ9UHG2 260 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 PADI4Q9UM07 663 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 U3KQA8 63 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 DOCK9Q9BZ29 2069 aa15.42■□□□□ 0.06
UBE3B-211ENST00000539843 LRRC53A6NM62 1247 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 PDE2AO00408 941 aaPredicted RBP15.41■□□□□ 0.06
UBE3B-211ENST00000539843 ATXN7O15265 892 aaPredicted RBP15.41■□□□□ 0.06
UBE3B-211ENST00000539843 YY2O15391 372 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 GZMAP12544 262 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 ATP1A3P13637 1013 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 MMP12P39900 470 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 LIG3P49916 1009 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 AP1S1P61966 158 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 IL10RBQ08334 325 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 KLHL30Q0D2K2 578 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 ZNF235Q14590 738 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 TPRG1LQ5T0D9 272 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 PLEKHA7Q6IQ23 1121 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 IGF2-ASQ6U949 168 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 CRTC1Q6UUV9 634 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 SLC35F3Q8IY50 421 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 NETO2Q8NC67 525 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 WDR36Q8NI36 951 aaKnown RBP15.41■□□□□ 0.06
UBE3B-211ENST00000539843 SLC39A7Q92504 469 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 ZNF653Q96CK0 615 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 WDR92Q96MX6 357 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 CCDC3Q9BQI4 270 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 BPIFA3Q9BQP9 254 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 APOOQ9BUR5 198 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 SNRNP25Q9BV90 132 aaKnown RBP15.41■□□□□ 0.06
UBE3B-211ENST00000539843 SLC39A8Q9C0K1 460 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 STRADBQ9C0K7 418 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 GPATCH2LQ9NWQ4 482 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 KCTD5Q9NXV2 234 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.41■□□□□ 0.06
UBE3B-211ENST00000539843 CNOT8Q9UFF9 292 aaKnown RBP15.41■□□□□ 0.06
UBE3B-211ENST00000539843 SEPT3Q9UH03 358 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 GPR34Q9UPC5 381 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 SATB2Q9UPW6 733 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 COQ6Q9Y2Z9 468 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 PCDHGA8Q9Y5G5 932 aa15.41■□□□□ 0.06
UBE3B-211ENST00000539843 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.4■□□□□ 0.06
UBE3B-211ENST00000539843 H3BRJ5 948 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 J3KR12 359 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 GCATO75600 419 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 ERCC2P18074 760 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 HSPA9P38646 679 aaKnown RBP15.4■□□□□ 0.06
UBE3B-211ENST00000539843 SRP54P61011 504 aaKnown RBP15.4■□□□□ 0.06
UBE3B-211ENST00000539843 NSUN2Q08J23 767 aaKnown RBP eCLIP15.4■□□□□ 0.06
UBE3B-211ENST00000539843 EIF3IQ13347 325 aaKnown RBP15.4■□□□□ 0.06
UBE3B-211ENST00000539843 INPP5AQ14642 412 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 NCAPHQ15003 741 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 AGERQ15109 404 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 TSR1Q2NL82 804 aaKnown RBP15.4■□□□□ 0.06
UBE3B-211ENST00000539843 WSCD2Q2TBF2 565 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 ANO6Q4KMQ2 910 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 TAF1BQ53T94 588 aaPredicted RBP15.4■□□□□ 0.06
UBE3B-211ENST00000539843 FOXR1Q6PIV2 292 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 IRF2BP2Q7Z5L9 587 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 CAMK1DQ8IU85 385 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 PCDH19Q8TAB3 1148 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 ATXN7L3BQ96GX2 97 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 TCEAL2Q9H3H9 227 aaPredicted RBP15.4■□□□□ 0.06
UBE3B-211ENST00000539843 HAUS4Q9H6D7 363 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 SIRPGQ9P1W8 387 aa15.4■□□□□ 0.06
UBE3B-211ENST00000539843 TDRD6O60522 2096 aaKnown RBP15.39■□□□□ 0.05
UBE3B-211ENST00000539843 CHD5Q8TDI0 1954 aa15.39■□□□□ 0.05
UBE3B-211ENST00000539843 CCDC187A0A096LP49 1063 aa15.39■□□□□ 0.05
UBE3B-211ENST00000539843 A0A1W2PQC6 194 aa15.39■□□□□ 0.05
UBE3B-211ENST00000539843 KLK10O43240 276 aa15.39■□□□□ 0.05
UBE3B-211ENST00000539843 ZW10O43264 779 aa15.39■□□□□ 0.05
UBE3B-211ENST00000539843 ATMINO43313 823 aaPredicted RBP15.39■□□□□ 0.05
UBE3B-211ENST00000539843 FTLP02792 175 aaPredicted RBP15.39■□□□□ 0.05
UBE3B-211ENST00000539843 KRT10P13645 584 aa15.39■□□□□ 0.05
UBE3B-211ENST00000539843 ITIH2P19823 946 aa15.39■□□□□ 0.05
UBE3B-211ENST00000539843 MIPP30301 263 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms