RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 PQLC3Q8N755 202 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 FNDC5Q8NAU1 212 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 OLIG1Q8TAK6 271 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 SLC2A14Q8TDB8 520 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 SKA2Q8WVK7 121 aaPredicted RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 SLC10A4Q96EP9 437 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 MAF1Q9H063 256 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 FAM124BQ9H5Z6 455 aaPredicted RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 CHRAC1Q9NRG0 131 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 PSME2Q9UL46 239 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 TMEM247A6NEH6 219 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 YDJCA8MPS7 323 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 CLPXO76031 633 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 LTFP02788 710 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 SMIM18P0DKX4 95 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 TGFB3P10600 412 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 THRBP10828 461 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 HOXB8P17481 243 aaPredicted RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 UBA1P22314 1058 aaKnown RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 L1CAMP32004 1257 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 GLUD2P49448 558 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 LSM3P62310 102 aaKnown RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 CLDN10P78369 228 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 TXNL4AP83876 142 aaKnown RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 RAB39AQ14964 217 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 ARMCX4Q5H9R4 360 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 FBXO47Q5MNV8 452 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 FKBP1CQ5VVH2 108 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 ANKS6Q68DC2 871 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 FAM126BQ8IXS8 530 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 NETO2Q8NC67 525 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 FLCNQ8NFG4 579 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 HDAC10Q969S8 669 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 DACT3Q96B18 629 aaPredicted RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 REXO4Q9GZR2 422 aaKnown RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 MAGEE1Q9HCI5 957 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 RIMS3Q9UJD0 308 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 PSAT1Q9Y617 370 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 NHSL1Q5SYE7 1610 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 FUOMA2VDF0 154 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 PDZK1P1A8MUH7 402 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 K7EPI3 171 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 AZIN1O14977 448 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 GLP2RO95838 553 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 SPATA31D3P0C874 917 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 YBX3P16989 372 aaKnown RBP eCLIP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 ERCC2P18074 760 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 GRIA2P42262 883 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 HALP42357 657 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 CDKL1Q00532 357 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 CDC42EP1Q00587 391 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 CNTN2Q02246 1040 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 RELAQ04206 551 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 CSTF3Q12996 717 aaKnown RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 PABPC1LQ4VXU2 614 aaKnown RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 PAGE2BQ5JRK9 111 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 FAM182AQ5T1J6 154 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 CACHD1Q5VU97 1274 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 STEAP4Q687X5 459 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 OGFOD2Q6N063 350 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 PAOXQ6QHF9 649 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 SPATA31D4Q6ZUB0 917 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 FIBCD1Q8N539 461 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 WDTC1Q8N5D0 677 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 PTGR2Q8N8N7 351 aaPredicted RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 C1orf127Q8N9H9 656 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 CDC26Q8NHZ8 85 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 RTP4Q96DX8 246 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 TUBA1CQ9BQE3 449 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 B3GNT5Q9BYG0 378 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 NIFKQ9BYG3 293 aaKnown RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 GBA3Q9H227 469 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 ALG2Q9H553 416 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 IFT80Q9P2H3 777 aaPredicted RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 FBXO5Q9UKT4 447 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 OAZ3Q9UMX2 235 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 KIF13BQ9NQT8 1826 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 GLI3P10071 1580 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 NCF1BA6NI72 391 aaPredicted RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 NCF1CA8MVU1 366 aaPredicted RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 G3V2T6 193 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 SYNCRIPO60506 623 aaKnown RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 NCF1P14598 390 aaPredicted RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 TSPAN8P19075 237 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 TMBIM6P55061 237 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 NIPAL4Q0D2K0 466 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 MAPRE1Q15691 268 aaKnown RBP6.88□□□□□ -1.31
SCAPER-203ENST00000538941 SLC25A52Q3SY17 297 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 VPS26BQ4G0F5 336 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 PITRM1Q5JRX3 1037 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 SPANXN2Q5MJ10 180 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 EEF1DP3Q658K8 133 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 PPP4R4Q6NUP7 873 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 PMF1Q6P1K2 205 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 PKN3Q6P5Z2 889 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 NOTUMQ6P988 496 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 SYTL1Q8IYJ3 562 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 CCDC185Q8N715 623 aa6.88□□□□□ -1.31
SCAPER-203ENST00000538941 AGBL3Q8NEM8 1001 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms