RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 FOXD3Q9UJU5 478 aaPredicted RBP9.04□□□□□ -0.96
MRE11-208ENST00000538923 URB1O60287 2271 aaKnown RBP9.04□□□□□ -0.96
MRE11-208ENST00000538923 CFAP46Q8IYW2 2715 aa9.04□□□□□ -0.96
MRE11-208ENST00000538923 ATMQ13315 3056 aa9.04□□□□□ -0.96
MRE11-208ENST00000538923 ACACAQ13085 2346 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 IGLON5A6NGN9 336 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 B8ZZF3 427 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 K7ENP7 123 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 RAD51BO15315 384 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 SRGAP2O75044 1071 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 ZMPSTE24O75844 475 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 PON1P27169 355 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 MAPK1P28482 360 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 ETFBP38117 255 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 DNA2P51530 1060 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 CCNHP51946 323 aaPredicted RBP9.03□□□□□ -0.96
MRE11-208ENST00000538923 GEMIN4P57678 1058 aaKnown RBP9.03□□□□□ -0.96
MRE11-208ENST00000538923 BPIFB4P59827 614 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 PFN3P60673 137 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 APBA1Q02410 837 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 GNA12Q03113 381 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 LY6DQ14210 128 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 DEFB133Q30KQ1 61 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 FAM102AQ5T9C2 384 aaPredicted RBP9.03□□□□□ -0.96
MRE11-208ENST00000538923 INO80CQ6PI98 192 aaPredicted RBP9.03□□□□□ -0.96
MRE11-208ENST00000538923 CCDC81Q6ZN84 652 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 PARS2Q7L3T8 475 aaKnown RBP9.03□□□□□ -0.96
MRE11-208ENST00000538923 SLC47A2Q86VL8 602 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 DENND6BQ8NEG7 585 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 OR7D4Q8NG98 312 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 WDR36Q8NI36 951 aaKnown RBP9.03□□□□□ -0.96
MRE11-208ENST00000538923 LMX1AQ8TE12 382 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 ASB12Q8WXK4 309 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 NAT6Q93015 286 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 ISG20Q96AZ6 181 aaKnown RBP9.03□□□□□ -0.96
MRE11-208ENST00000538923 ARHGEF26Q96DR7 871 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 TBATAQ96M53 351 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 TBCBQ99426 244 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 KLF6Q99612 283 aaPredicted RBP9.03□□□□□ -0.96
MRE11-208ENST00000538923 BOCQ9BWV1 1114 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 ZYG11BQ9C0D3 744 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 PDCL3Q9H2J4 239 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 ZDHHC6Q9H6R6 413 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 PLCB1Q9NQ66 1216 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 NOP53Q9NZM5 478 aaKnown RBP9.03□□□□□ -0.96
MRE11-208ENST00000538923 PPARGC1AQ9UBK2 798 aaKnown RBP9.03□□□□□ -0.96
MRE11-208ENST00000538923 SPASTQ9UBP0 616 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 APOBEC3BQ9UH17 382 aaKnown RBP9.03□□□□□ -0.96
MRE11-208ENST00000538923 RWDD2AQ9UIY3 292 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 DCTN4Q9UJW0 460 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 ENTPD2Q9Y5L3 495 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 SNX10Q9Y5X0 201 aa9.03□□□□□ -0.96
MRE11-208ENST00000538923 A0A1W2PNU3 283 aaPredicted RBP9.02□□□□□ -0.97
MRE11-208ENST00000538923 CDRT15L2A8MXV6 281 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 LMO7DNF2Z398 122 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 TOR1BO14657 336 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 MUSKO15146 869 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 GABRB2P47870 512 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 THOP1P52888 689 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 ARF5P84085 180 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 POLD3Q15054 466 aaPredicted RBP9.02□□□□□ -0.97
MRE11-208ENST00000538923 ZNF805Q5CZA5 627 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 PRRT3Q5FWE3 981 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 ESRP1Q6NXG1 681 aaKnown RBP9.02□□□□□ -0.97
MRE11-208ENST00000538923 CLEC14AQ86T13 490 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 DRC7Q8IY82 874 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 RYBPQ8N488 228 aaPredicted RBP9.02□□□□□ -0.97
MRE11-208ENST00000538923 MSANTD4Q8NCY6 345 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 PMEPA1Q969W9 287 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 C18orf8Q96DM3 657 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 TRIM11Q96F44 468 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 MED8Q96G25 268 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 PRR11Q96HE9 360 aaPredicted RBP9.02□□□□□ -0.97
MRE11-208ENST00000538923 C1QTNF7Q9BXJ2 289 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 OSBPL1AQ9BXW6 950 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 SLC13A1Q9BZW2 595 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 TM6SF2Q9BZW4 377 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 SUV39H2Q9H5I1 410 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 RETREG1Q9H6L5 497 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 HECAQ9UBI9 543 aaPredicted RBP9.02□□□□□ -0.97
MRE11-208ENST00000538923 ZNF212Q9UDV6 495 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 DNAJC12Q9UKB3 198 aa9.02□□□□□ -0.97
MRE11-208ENST00000538923 HELZ2Q9BYK8 2649 aaKnown RBP9.02□□□□□ -0.97
MRE11-208ENST00000538923 CCDC187A0A096LP49 1063 aa9.01□□□□□ -0.97
MRE11-208ENST00000538923 C16orf96A6NNT2 1141 aa9.01□□□□□ -0.97
MRE11-208ENST00000538923 FOXN3O00409 490 aaPredicted RBP9.01□□□□□ -0.97
MRE11-208ENST00000538923 KRIT1O00522 736 aa9.01□□□□□ -0.97
MRE11-208ENST00000538923 GCATO75600 419 aa9.01□□□□□ -0.97
MRE11-208ENST00000538923 TNFSF15O95150 251 aa9.01□□□□□ -0.97
MRE11-208ENST00000538923 LSM8O95777 96 aaKnown RBP9.01□□□□□ -0.97
MRE11-208ENST00000538923 GSRP00390 522 aa9.01□□□□□ -0.97
MRE11-208ENST00000538923 ANXA6P08133 673 aa9.01□□□□□ -0.97
MRE11-208ENST00000538923 ITGA2BP08514 1039 aa9.01□□□□□ -0.97
MRE11-208ENST00000538923 CDH5P33151 784 aaPredicted RBP9.01□□□□□ -0.97
MRE11-208ENST00000538923 MTIF2P46199 727 aaKnown RBP9.01□□□□□ -0.97
MRE11-208ENST00000538923 ADKP55263 362 aaKnown RBP9.01□□□□□ -0.97
MRE11-208ENST00000538923 YPEL5P62699 121 aa9.01□□□□□ -0.97
MRE11-208ENST00000538923 EIF2B5Q13144 721 aaKnown RBP9.01□□□□□ -0.97
MRE11-208ENST00000538923 SPIDRQ14159 915 aa9.01□□□□□ -0.97
MRE11-208ENST00000538923 TPRG1LQ5T0D9 272 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms