RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SBK3P0C264 359 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 CD70P32970 193 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 ABL2P42684 1182 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 CTSOP43234 321 aaPredicted RBP14.21□□□□□ -0.13
ACTN1-205ENST00000538545 STK19P49842 368 aaPredicted RBP14.21□□□□□ -0.13
ACTN1-205ENST00000538545 KCNJ2P63252 427 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 OCRLQ01968 901 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 TRAF2Q12933 501 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 NAB1Q13506 487 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 TEAD2Q15562 447 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 TAF1BQ53T94 588 aaPredicted RBP14.21□□□□□ -0.13
ACTN1-205ENST00000538545 VWA5B1Q5TIE3 1220 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 Q6ZNB5 142 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 TBC1D1Q86TI0 1168 aaPredicted RBP14.21□□□□□ -0.13
ACTN1-205ENST00000538545 ITIH5Q86UX2 942 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 SPPL3Q8TCT6 385 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 PPP1R36Q96LQ0 422 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 FAM96AQ9H5X1 160 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 ECT2Q9H8V3 914 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.21□□□□□ -0.13
ACTN1-205ENST00000538545 MKS1Q9NXB0 559 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 DCDC2Q9UHG0 476 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 CDH22Q9UJ99 828 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 RUVBL2Q9Y230 463 aaKnown RBP14.21□□□□□ -0.13
ACTN1-205ENST00000538545 SH3BP1Q9Y3L3 701 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 LUC7L3O95232 432 aaKnown RBP14.21□□□□□ -0.14
ACTN1-205ENST00000538545 OLFM2O95897 454 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 GOT2P00505 430 aaKnown RBP14.21□□□□□ -0.14
ACTN1-205ENST00000538545 CTPS1P17812 591 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 MAGEA12P43365 314 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 STX3Q13277 289 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 FYB2Q5VWT5 728 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 RNF43Q68DV7 783 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 KIAA0930Q6ICG6 404 aaPredicted RBP14.21□□□□□ -0.14
ACTN1-205ENST00000538545 C2CD4AQ8NCU7 369 aaPredicted RBP14.21□□□□□ -0.14
ACTN1-205ENST00000538545 GRAMD1AQ96CP6 724 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 SCYL1Q96KG9 808 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 TRIB3Q96RU7 358 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 TRIM55Q9BYV6 548 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 LINC00597Q9H2U6 94 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 PNPOQ9NVS9 261 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 HAO1Q9UJM8 370 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 USH1CQ9Y6N9 552 aa14.21□□□□□ -0.14
ACTN1-205ENST00000538545 CCDC162PA2VCL2 907 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 MROH6A6NGR9 719 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 LEFTY2O00292 366 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 TIMM44O43615 452 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 ZMPSTE24O75844 475 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 CR2P20023 1033 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 BMPR1AP36894 532 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 CSE1LP55060 971 aaKnown RBP14.2□□□□□ -0.14
ACTN1-205ENST00000538545 NCALDP61601 193 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 PPIGQ13427 754 aaKnown RBP eCLIP14.2□□□□□ -0.149e-12■□□□□ 11
ACTN1-205ENST00000538545 C9orf50Q5SZB4 431 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 GPR158Q5T848 1215 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 MRPL43Q8N983 215 aaKnown RBP14.2□□□□□ -0.14
ACTN1-205ENST00000538545 OR4K2Q8NGD2 314 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 SHKBP1Q8TBC3 707 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 ACMSDQ8TDX5 336 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 CEP295NLQ96MC4 621 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 LRRC37BQ96QE4 947 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 RAD9AQ99638 391 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 C1QTNF1Q9BXJ1 281 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 MAN1C1Q9NR34 630 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 DNMT3BQ9UBC3 853 aaKnown RBP14.2□□□□□ -0.14
ACTN1-205ENST00000538545 SLC12A4Q9UP95 1085 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 RAI2Q9Y5P3 530 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 LINC01553A4QN01 128 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 G3V2L1 256 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 ALPIP09923 528 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 TROVE2P10155 538 aaKnown RBP eCLIP14.2□□□□□ -0.14
ACTN1-205ENST00000538545 CPA3P15088 417 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 ARFIP2P53365 341 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 CSHL1Q14406 222 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 PABPC1LQ4VXU2 614 aaKnown RBP14.2□□□□□ -0.14
ACTN1-205ENST00000538545 PPM1LQ5SGD2 360 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 KYAT3Q6YP21 454 aaKnown RBP14.2□□□□□ -0.14
ACTN1-205ENST00000538545 CLEC14AQ86T13 490 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 SETD3Q86TU7 594 aaPredicted RBP14.2□□□□□ -0.14
ACTN1-205ENST00000538545 CAMK1DQ8IU85 385 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 FSTL5Q8N475 847 aaPredicted RBP14.2□□□□□ -0.14
ACTN1-205ENST00000538545 TMEM151AQ8N4L1 468 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 C12orf76Q8N812 135 aaPredicted RBP14.2□□□□□ -0.14
ACTN1-205ENST00000538545 ZSWIM3Q96MP5 696 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 NMRAL1Q9HBL8 299 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 ASAH2Q9NR71 780 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 TLK1Q9UKI8 766 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 INTS6Q9UL03 887 aaKnown RBP14.2□□□□□ -0.14
ACTN1-205ENST00000538545 DNAJC16Q9Y2G8 782 aa14.2□□□□□ -0.14
ACTN1-205ENST00000538545 AP3B1O00203 1094 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 PIGNO95427 931 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 PAMP19021 973 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 CD151P48509 253 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 CLCN4P51793 760 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 AQP5P55064 265 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 USP4Q13107 963 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 GALNTL6Q49A17 601 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 LACTB2Q53H82 288 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-205ENST00000538545 UBE2Q1Q7Z7E8 422 aa14.19□□□□□ -0.14
ACTN1-205ENST00000538545 CILP2Q8IUL8 1156 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms