RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 ERMARDQ5T6L9 678 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 FAXCQ5TGI0 409 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 AFMIDQ63HM1 303 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 CAVIN1Q6NZI2 390 aaKnown RBP8.72□□□□□ -1.01
DDB1-212ENST00000538470 LVRNQ6Q4G3 990 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 GPR155Q7Z3F1 870 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 IRF2BP2Q7Z5L9 587 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 SPACA3Q8IXA5 215 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 SLC35F3Q8IY50 421 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 OR6C4Q8NGE1 309 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 SCG3Q8WXD2 468 aaKnown RBP8.72□□□□□ -1.01
DDB1-212ENST00000538470 TRIM11Q96F44 468 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 EXOC2Q96KP1 924 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 WRAP53Q9BUR4 548 aaKnown RBP8.72□□□□□ -1.01
DDB1-212ENST00000538470 SNRNP25Q9BV90 132 aaKnown RBP8.72□□□□□ -1.01
DDB1-212ENST00000538470 CINPQ9BW66 212 aaPredicted RBP8.72□□□□□ -1.01
DDB1-212ENST00000538470 DHX35Q9H5Z1 703 aaKnown RBP8.72□□□□□ -1.01
DDB1-212ENST00000538470 PCDH12Q9NPG4 1184 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 ASCL3Q9NQ33 180 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 MBNL1Q9NR56 388 aaKnown RBP8.72□□□□□ -1.01
DDB1-212ENST00000538470 DOLKQ9UPQ8 538 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 PCDHGA8Q9Y5G5 932 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 UNC13CQ8NB66 2214 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 AHCTF1Q8WYP5 2266 aa8.71□□□□□ -1.01
DDB1-212ENST00000538470 A0A1W2PQ67 120 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 A0A1W2PQC6 194 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 LRRC53A6NM62 1247 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 J3KR12 359 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 MUSKO15146 869 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 DAPK3O43293 454 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 PRPSAP2O60256 369 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 GCATO75600 419 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 MYBL1P10243 752 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 GZMAP12544 262 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 MYF5P13349 255 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 TSHRP16473 764 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 KELP23276 732 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 RBMS1P29558 406 aaKnown RBP8.71□□□□□ -1.02
DDB1-212ENST00000538470 HSPA9P38646 679 aaKnown RBP8.71□□□□□ -1.02
DDB1-212ENST00000538470 PRKCIP41743 596 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 HCAR3P49019 387 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 PAPOLAP51003 745 aaKnown RBP8.71□□□□□ -1.02
DDB1-212ENST00000538470 RENBPP51606 427 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 ADKP55263 362 aaKnown RBP8.71□□□□□ -1.02
DDB1-212ENST00000538470 KIAA1024LP59773 190 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 IL10RBQ08334 325 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 SPIDRQ14159 915 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 ASIC2Q16515 512 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 ALG11Q2TAA5 492 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 FILIP1LQ4L180 1135 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 PERM1Q5SV97 790 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 TMCO4Q5TGY1 634 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 RFX8Q6ZV50 586 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 GKN2Q86XP6 184 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 ARHGAP12Q8IWW6 846 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 LZTR1Q8N653 840 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 PCDH19Q8TAB3 1148 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 KCNE4Q8WWG9 221 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 SPOCK2Q92563 424 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 ECHDC3Q96DC8 303 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 CCDC97Q96F63 343 aaPredicted RBP8.71□□□□□ -1.02
DDB1-212ENST00000538470 LIN37Q96GY3 246 aaPredicted RBP8.71□□□□□ -1.02
DDB1-212ENST00000538470 CELF6Q96J87 481 aaKnown RBP8.71□□□□□ -1.02
DDB1-212ENST00000538470 WDR92Q96MX6 357 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 KCTD15Q96SI1 283 aaPredicted RBP8.71□□□□□ -1.02
DDB1-212ENST00000538470 APOOQ9BUR5 198 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 DPH1Q9BZG8 443 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 EDEM3Q9BZQ6 932 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 CLPBQ9H078 707 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 TCEAL2Q9H3H9 227 aaPredicted RBP8.71□□□□□ -1.02
DDB1-212ENST00000538470 CAAP1Q9H8G2 361 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 MRPL47Q9HD33 250 aaKnown RBP8.71□□□□□ -1.02
DDB1-212ENST00000538470 GPATCH2LQ9NWQ4 482 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 TAS2R14Q9NYV8 317 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 AIPL1Q9NZN9 384 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 TMEM63CQ9P1W3 806 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 KLQ9UEF7 1012 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 PNMA8BQ9ULN7 279 aaPredicted RBP8.71□□□□□ -1.02
DDB1-212ENST00000538470 COQ6Q9Y2Z9 468 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 ENTPD2Q9Y5L3 495 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 DGKBQ9Y6T7 804 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 ZFC3H1O60293 1989 aaKnown RBP8.71□□□□□ -1.02
DDB1-212ENST00000538470 KALRNO60229 2985 aa8.71□□□□□ -1.02
DDB1-212ENST00000538470 CCDC187A0A096LP49 1063 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.7□□□□□ -1.02
DDB1-212ENST00000538470 TMEM191CA6NGB0 347 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 CAPN8A6NHC0 703 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 SMTNL1A8MU46 457 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 ERVH48-1M5A8F1 160 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 CACNB4O00305 520 aaPredicted RBP8.7□□□□□ -1.02
DDB1-212ENST00000538470 NTN3O00634 580 aaPredicted RBP8.7□□□□□ -1.02
DDB1-212ENST00000538470 YY2O15391 372 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 ATMINO43313 823 aaPredicted RBP8.7□□□□□ -1.02
DDB1-212ENST00000538470 SOCS5O75159 536 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 LRCH4O75427 683 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 PALMO75781 387 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 PCCBP05166 539 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 HOXC4P09017 264 aaPredicted RBP8.7□□□□□ -1.02
DDB1-212ENST00000538470 ELFN1P0C7U0 828 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 CTSEP14091 401 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms