RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 IGSF5Q9NSI5 407 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 GEMIN8Q9NWZ8 242 aaKnown RBP9.32□□□□□ -0.92
DDB1-211ENST00000538280 MARCH5Q9NX47 278 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 TMEM161AQ9NX61 479 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 XPR1Q9UBH6 696 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 NUDT5Q9UKK9 219 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 FBXO5Q9UKT4 447 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 RIMKLBQ9ULI2 386 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 MAGED2Q9UNF1 606 aaPredicted RBP9.32□□□□□ -0.92
DDB1-211ENST00000538280 RUVBL2Q9Y230 463 aaKnown RBP9.32□□□□□ -0.92
DDB1-211ENST00000538280 NOD1Q9Y239 953 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 MICAL3Q7RTP6 2002 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 WDFY4Q6ZS81 3184 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 ANKRD36A6QL64 1941 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 LOC285095A0A1B0GVY8 99 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 CCDC78A2IDD5 438 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 MTMR11A4FU01 709 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 MROH6A6NGR9 719 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 J3KR12 359 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 SLC7A4O43246 635 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 CNTN5O94779 1100 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 PIGNO95427 931 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 CHRNGP07510 517 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 ATXN1LP0C7T5 689 aaKnown RBP9.31□□□□□ -0.92
DDB1-211ENST00000538280 HAPLN1P10915 354 aaPredicted RBP9.31□□□□□ -0.92
DDB1-211ENST00000538280 CPB1P15086 417 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 ANPEPP15144 967 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 ATP5F1P24539 256 aaPredicted RBP9.31□□□□□ -0.92
DDB1-211ENST00000538280 YWHAQP27348 245 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 PIK3R1P27986 724 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 SLC26A3P40879 764 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 OR1G1P47890 313 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 MAPKAPK2P49137 400 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 SERPINH1P50454 418 aaKnown RBP9.31□□□□□ -0.92
DDB1-211ENST00000538280 YBEYP58557 167 aaPredicted RBP9.31□□□□□ -0.92
DDB1-211ENST00000538280 DEFB103AP81534 67 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 SLC25A3Q00325 362 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 SATB1Q01826 763 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 SLC10A7Q0GE19 358 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 SMARCB1Q12824 385 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 CTBP1Q13363 440 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 BTG3Q14201 252 aaPredicted RBP9.31□□□□□ -0.92
DDB1-211ENST00000538280 GPNMBQ14956 572 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 CCDC6Q16204 474 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 PARP15Q460N3 678 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 ARL13AQ5H913 290 aaPredicted RBP9.31□□□□□ -0.92
DDB1-211ENST00000538280 SDHAF4Q5VUM1 108 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 ALG1LQ6GMV1 187 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 ANO7Q6IWH7 933 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 ZNF280DQ6N043 979 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 NEPROQ6NW34 567 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 FBXL22Q6P050 247 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 RAPH1Q70E73 1250 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 TMC7Q7Z402 723 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 SETD3Q86TU7 594 aaPredicted RBP9.31□□□□□ -0.92
DDB1-211ENST00000538280 PHTF2Q8N3S3 785 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 PGBD5Q8N414 524 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 TTC9BQ8N6N2 239 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 POU5F2Q8N7G0 328 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 KDM1BQ8NB78 822 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 OR13J1Q8NGT2 312 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 SPPL2BQ8TCT7 592 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 CALML6Q8TD86 181 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 JADE3Q92613 823 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 PEX13Q92968 403 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 STMN2Q93045 179 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 IGSF8Q969P0 613 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 NXNL1Q96CM4 212 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 ELMO2Q96JJ3 720 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 ZNF599Q96NL3 588 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 OMDQ99983 421 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 MRPL57Q9BQC6 102 aaKnown RBP9.31□□□□□ -0.92
DDB1-211ENST00000538280 FSD1LQ9BXM9 530 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 MFSD1Q9H3U5 465 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 RETREG1Q9H6L5 497 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 PDFQ9HBH1 243 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 TCF7L2Q9NQB0 619 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 CPSF2Q9P2I0 782 aaKnown RBP9.31□□□□□ -0.92
DDB1-211ENST00000538280 ZDHHC2Q9UIJ5 367 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 VPS28Q9UK41 221 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 WASF2Q9Y6W5 498 aa9.31□□□□□ -0.92
DDB1-211ENST00000538280 C5orf42Q9H799 3197 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 A6NHS1 94 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 AURKAO14965 403 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 BUD23O43709 281 aaKnown RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 SMNDC1O75940 238 aaKnown RBP eCLIP9.3□□□□□ -0.92
DDB1-211ENST00000538280 PENKP01210 267 aaPredicted RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 POU3F3P20264 500 aaPredicted RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 PSMA3P25788 255 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 AVPR1AP37288 418 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 CD86P42081 329 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 NAGLUP54802 743 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 MTTPP55157 894 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 MXRA7P84157 204 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 DSC2Q02487 901 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 GALNT1Q10472 559 aaPredicted RBP9.3□□□□□ -0.92
DDB1-211ENST00000538280 EFEMP1Q12805 493 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 GPR17Q13304 367 aa9.3□□□□□ -0.92
DDB1-211ENST00000538280 SERINC3Q13530 473 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms