RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 ZNF778Q96MU6 729 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 GABRG3Q99928 467 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 FOXP3Q9BZS1 431 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 C2orf42Q9NWW7 574 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 PPM1HQ9ULR3 514 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 KCTD3Q9Y597 815 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 SDR42E2A6NKP2 422 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 A8MX80 341 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 ANKRD66B4E2M5 251 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 KPNA3O00505 521 aaPredicted RBP15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 BUD23O43709 281 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 ERLIN1O75477 346 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 IL1BP01584 269 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 SLC4A1P02730 911 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 FGF1P05230 155 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 HOXB2P14652 356 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 ABL2P42684 1182 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 PSMD8P48556 350 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 PMS2P54278 862 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 GPX6P59796 221 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 RAD51Q06609 339 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 FZD5Q13467 585 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 CAMK2GQ13555 558 aaPredicted RBP15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 SEPT6Q14141 434 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 PTPRCAPQ14761 206 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 DNAJC21Q5F1R6 531 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 PIP4K2CQ8TBX8 421 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 BLOC1S5Q8TDH9 187 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 HNRNPLLQ8WVV9 542 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 ARRDC3Q96B67 414 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 FRMD8Q9BZ67 464 aaPredicted RBP15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 CD248Q9HCU0 757 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 LTB4R2Q9NPC1 389 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 CHRAC1Q9NRG0 131 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 SUN2Q9UH99 717 aa15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 ARIH1Q9Y4X5 557 aaPredicted RBP15.75■□□□□ 0.11
SFSWAP-206ENST00000537582 ACSL3O95573 720 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 SSTR1P30872 391 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 COPAP53621 1224 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 EPHB1P54762 984 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 STARD6P59095 220 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 MRPS21P82921 87 aaKnown RBP15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 GAS6Q14393 721 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 MAP9Q49MG5 647 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 TMEM92Q6UXU6 159 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 PARS2Q7L3T8 475 aaKnown RBP15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 UBALD2Q8IYN6 164 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 FLCNQ8NFG4 579 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 PYROXD1Q8WU10 500 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 STAMBPL1Q96FJ0 436 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 ZNF641Q96N77 438 aaPredicted RBP15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 FCRL3Q96P31 734 aaPredicted RBP15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 EBNA1BP2Q99848 306 aaKnown RBP15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 ADGRE3Q9BY15 652 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 LMAN1LQ9HAT1 526 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 LRRC4CQ9HCJ2 640 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 IL1RAPL1Q9NZN1 696 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 BFARQ9NZS9 450 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 SLC2A6Q9UGQ3 507 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 ARL5AQ9Y689 179 aa15.74■□□□□ 0.11
SFSWAP-206ENST00000537582 KANSL1LA0AUZ9 987 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 FAM170BA6NMN3 283 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 CCL22O00626 93 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 NPC1O15118 1278 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 EIF3HO15372 352 aaKnown RBP eCLIP15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 SYNCRIPO60506 623 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 PIAS1O75925 651 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 TIMP2P16035 220 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 CA4P22748 312 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 NMBRP28336 390 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 HNF1BP35680 557 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 HSD17B3P37058 310 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 NPY2RP49146 381 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 CBLBQ13191 982 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 SLMAPQ14BN4 828 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 FBXO43Q4G163 708 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 ZNF805Q5CZA5 627 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 CFAP58Q5T655 872 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 UNC5AQ6ZN44 842 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 TSPAN33Q86UF1 283 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 RELL1Q8IUW5 271 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 UNC5BQ8IZJ1 945 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 MDGA1Q8NFP4 955 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 KCNV2Q8TDN2 545 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 UBLCP1Q8WVY7 318 aaPredicted RBP15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 PHACTR1Q9C0D0 580 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 IL22Q9GZX6 179 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 MKRN2Q9H000 416 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 RSPH9Q9H1X1 276 aaPredicted RBP15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 TBC1D17Q9HA65 648 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 ARFGAP3Q9NP61 516 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 ARGLU1Q9NWB6 273 aaPredicted RBP15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 ZNF446Q9NWS9 450 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 ZC3H7BQ9UGR2 993 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 ITM2BQ9Y287 266 aa15.73■□□□□ 0.11
SFSWAP-206ENST00000537582 A0A0J9YYE9 177 aa15.72■□□□□ 0.11
SFSWAP-206ENST00000537582 TSPAN11A1L157 253 aa15.72■□□□□ 0.11
SFSWAP-206ENST00000537582 NPIPB15A6NHN6 443 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-206ENST00000537582 C16orf96A6NNT2 1141 aa15.72■□□□□ 0.11
SFSWAP-206ENST00000537582 RIPK2O43353 540 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms