RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 PABPC3Q9H361 631 aaKnown RBP24.4■■□□□ 1.5
HMGA2-208ENST00000537429 DYRK4Q9NR20 520 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 PPIL1Q9Y3C6 166 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 ESYT3A0FGR9 886 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 NDC80O14777 642 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 ACADMP11310 421 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 TIMP2P16035 220 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 GRIA4P48058 902 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 CALCOCO2Q13137 446 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 UGP2Q16851 508 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 SIRPB2Q5JXA9 342 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 ERN2Q76MJ5 926 aaKnown RBP24.4■■□□□ 1.5
HMGA2-208ENST00000537429 MCUQ8NE86 351 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 LPCAT1Q8NF37 534 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 FAM131CQ96AQ9 280 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 RMDN1Q96DB5 314 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 ANAPC5Q9UJX4 755 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 SHOC2Q9UQ13 582 aa24.4■■□□□ 1.5
HMGA2-208ENST00000537429 K7ESF4 209 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 SMAPO00193 183 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 APBB3O95704 486 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 P2RY2P41231 377 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 EPHB1P54762 984 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 CNTN1Q12860 1018 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 QPCTQ16769 361 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 ZNF534Q76KX8 674 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 TTC7BQ86TV6 843 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 HDDC3Q8N4P3 179 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 SLC25A41Q8N5S1 370 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 OR52K1Q8NGK4 314 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 GANCQ8TET4 914 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 CASS4Q9NQ75 786 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 SERGEFQ9UGK8 458 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 ZDBF2Q9HCK1 2354 aa24.39■■□□□ 1.49
HMGA2-208ENST00000537429 A0A1W2PP55 124 aa24.38■■□□□ 1.49
HMGA2-208ENST00000537429 PLK4O00444 970 aa24.38■■□□□ 1.49
HMGA2-208ENST00000537429 LAMTOR5O43504 91 aa24.38■■□□□ 1.49
HMGA2-208ENST00000537429 FGF1P05230 155 aa24.38■■□□□ 1.49
HMGA2-208ENST00000537429 NEK3P51956 506 aa24.38■■□□□ 1.49
HMGA2-208ENST00000537429 SARNPP82979 210 aaKnown RBP24.38■■□□□ 1.49
HMGA2-208ENST00000537429 TTC31Q49AM3 519 aaPredicted RBP24.38■■□□□ 1.49
HMGA2-208ENST00000537429 PIP5KL1Q5T9C9 394 aa24.38■■□□□ 1.49
HMGA2-208ENST00000537429 FBXL19Q6PCT2 694 aa24.38■■□□□ 1.49
HMGA2-208ENST00000537429 GDF3Q9NR23 364 aa24.38■■□□□ 1.49
HMGA2-208ENST00000537429 FAM114A2Q9NRY5 505 aa24.38■■□□□ 1.49
HMGA2-208ENST00000537429 FBXL12Q9NXK8 326 aa24.38■■□□□ 1.49
HMGA2-208ENST00000537429 EBF1Q9UH73 591 aa24.38■■□□□ 1.49
HMGA2-208ENST00000537429 A0A0J9YYE9 177 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 UPK3BL1B0FP48 263 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 UPK3BL2E5RIL1 263 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 TRBC1P01850 177 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 ADRB3P13945 408 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 CDH17Q12864 832 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 AGBL4Q5VU57 503 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 LRRC8BQ6P9F7 803 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 PPP1R21Q6ZMI0 780 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 USP30Q70CQ3 517 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 DTWD2Q8NBA8 298 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 UBXN4Q92575 508 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 ART4Q93070 314 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 SCRN2Q96FV2 425 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 OMDQ99983 421 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 C11orf16Q9NQ32 467 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 ITM2CQ9NQX7 267 aa24.37■■□□□ 1.49
HMGA2-208ENST00000537429 USP36Q9P275 1121 aaKnown RBP24.37■■□□□ 1.49
HMGA2-208ENST00000537429 GOLGA8MH3BSY2 632 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 RNASEH2AO75792 299 aaKnown RBP24.36■■□□□ 1.49
HMGA2-208ENST00000537429 ABL2P42684 1182 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 PXNP49023 591 aaPredicted RBP24.36■■□□□ 1.49
HMGA2-208ENST00000537429 SUOXP51687 545 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 CCDC15Q0P6D6 951 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 SFSWAPQ12872 951 aaKnown RBP24.36■■□□□ 1.49
HMGA2-208ENST00000537429 MSLNQ13421 630 aaPredicted RBP24.36■■□□□ 1.49
HMGA2-208ENST00000537429 ZDHHC24Q6UX98 284 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.36■■□□□ 1.49
HMGA2-208ENST00000537429 KBTBD6Q86V97 674 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 CAND1Q86VP6 1230 aaKnown RBP24.36■■□□□ 1.49
HMGA2-208ENST00000537429 C1orf210Q8IVY1 113 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 NDUFAF2Q8N183 169 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 DNAAF3Q8N9W5 541 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 RAB7BQ96AH8 199 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 SERPINB12Q96P63 405 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 SMIM14Q96QK8 99 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 MCCC1Q96RQ3 725 aaPredicted RBP24.36■■□□□ 1.49
HMGA2-208ENST00000537429 NEUROG2Q9H2A3 272 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 EPC1Q9H2F5 836 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 ANKZF1Q9H8Y5 726 aa24.36■■□□□ 1.49
HMGA2-208ENST00000537429 PRMT8Q9NR22 394 aaPredicted RBP24.36■■□□□ 1.49
HMGA2-208ENST00000537429 PIH1D1Q9NWS0 290 aaKnown RBP24.36■■□□□ 1.49
HMGA2-208ENST00000537429 AP3B1O00203 1094 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 PRKCGP05129 697 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 ALPIP09923 528 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 MLNP12872 115 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 CTPS1P17812 591 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 XPAP23025 273 aaPredicted RBP24.35■■□□□ 1.49
HMGA2-208ENST00000537429 AVPR2P30518 371 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 HOXA6P31267 233 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 TPMTP51580 245 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 PLTPP55058 493 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 CAV1Q03135 178 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms