RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 APCP25054 2843 aa6.9□□□□□ -1.31
CCDC60-203ENST00000536742 MYO16Q9Y6X6 1858 aa6.9□□□□□ -1.31
CCDC60-203ENST00000536742 TDRD15B5MCY1 1934 aaKnown RBP6.89□□□□□ -1.31
CCDC60-203ENST00000536742 HIVEP3Q5T1R4 2406 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 IGKV6D-21A0A0A0MT36 114 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 ARL5CA6NH57 179 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 TMEM200CA6NKL6 621 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 SYNCRIPO60506 623 aaKnown RBP6.89□□□□□ -1.31
CCDC60-203ENST00000536742 FAM20BO75063 409 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 ZNF217O75362 1048 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 ERN1O75460 977 aaKnown RBP6.89□□□□□ -1.31
CCDC60-203ENST00000536742 BCAR3O75815 825 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 XRCC6P12956 609 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCDC60-203ENST00000536742 HDCP19113 662 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 HMGA2P52926 109 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 CLDN6P56747 220 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 BLOC1S1P78537 153 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 MRPS21P82921 87 aaKnown RBP6.89□□□□□ -1.31
CCDC60-203ENST00000536742 SLC25A3Q00325 362 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 ILKQ13418 452 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 ASPRV1Q53RT3 343 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 SPNS3Q6ZMD2 512 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 CLNKQ7Z7G1 428 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 LINC01465Q8N7H1 131 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 MIB2Q96AX9 1013 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 CCNL2Q96S94 520 aaPredicted RBP6.89□□□□□ -1.31
CCDC60-203ENST00000536742 SDF4Q9BRK5 362 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 ZNF700Q9H0M5 742 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 BHMT2Q9H2M3 363 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 ADNPQ9H2P0 1102 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 KIAA1586Q9HCI6 787 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 GALNT9Q9HCQ5 603 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 MTRRQ9UBK8 725 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 CDYLQ9Y232 598 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 MTO1Q9Y2Z2 717 aaKnown RBP6.89□□□□□ -1.31
CCDC60-203ENST00000536742 HS3ST3A1Q9Y663 406 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 NUP210Q8TEM1 1887 aaPredicted RBP6.89□□□□□ -1.31
CCDC60-203ENST00000536742 LRRK1Q38SD2 2015 aa6.89□□□□□ -1.31
CCDC60-203ENST00000536742 FN1P02751 2386 aaKnown RBP6.88□□□□□ -1.31
CCDC60-203ENST00000536742 E9PLN8 166 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 ZBTB5O15062 677 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 GPAA1O43292 621 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 ORC4O43929 436 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 CSDE1O75534 798 aaKnown RBP6.88□□□□□ -1.31
CCDC60-203ENST00000536742 NCR1O76036 304 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 PIM1P11309 404 aaPredicted RBP6.88□□□□□ -1.31
CCDC60-203ENST00000536742 DDX6P26196 483 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCDC60-203ENST00000536742 ANXA11P50995 505 aaKnown RBP6.88□□□□□ -1.31
CCDC60-203ENST00000536742 WNT3P56703 355 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 HSD11B2P80365 405 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 RAB32Q13637 225 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 TIGD2Q4W5G0 525 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 COBLL1Q53SF7 1204 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 RHOUQ7L0Q8 258 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 CATSPER4Q7RTX7 472 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 Q8N1X5 172 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 HMGB4Q8WW32 186 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 RFFLQ8WZ73 363 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 NMD3Q96D46 503 aaKnown RBP6.88□□□□□ -1.31
CCDC60-203ENST00000536742 SGF29Q96ES7 293 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 ZNF668Q96K58 619 aaPredicted RBP6.88□□□□□ -1.31
CCDC60-203ENST00000536742 NT5C1BQ96P26 610 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 MTMR9Q96QG7 549 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 TRIB1Q96RU8 372 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 VKORC1Q9BQB6 163 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 TLR10Q9BXR5 811 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 EBF3Q9H4W6 596 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 CYP4F11Q9HBI6 524 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 HPS4Q9NQG7 708 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.88□□□□□ -1.31
CCDC60-203ENST00000536742 DKK2Q9UBU2 259 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 INSL5Q9Y5Q6 135 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 BSNQ9UPA5 3926 aa6.88□□□□□ -1.31
CCDC60-203ENST00000536742 NFASCO94856 1347 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 PRAMEF33A0A0G2JMD5 474 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 HNRNPRO43390 633 aaKnown RBP6.87□□□□□ -1.31
CCDC60-203ENST00000536742 PRAMEF10O60809 474 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 CDKL5O76039 1030 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 FGF19O95750 216 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 LDOC1O95751 146 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-203ENST00000536742 ABHD16AO95870 558 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 FOSP01100 380 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-203ENST00000536742 KITP10721 976 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 ACVRL1P37023 503 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 MLH1P40692 756 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 CYP4A11Q02928 519 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 HLXQ14774 488 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-203ENST00000536742 CNGA2Q16280 664 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 ZSCAN23Q3MJ62 389 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 CRB2Q5IJ48 1285 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 EOGTQ5NDL2 527 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 B3GNTL1Q67FW5 361 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-203ENST00000536742 SP5Q6BEB4 398 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-203ENST00000536742 TIPARPQ7Z3E1 657 aaKnown RBP6.87□□□□□ -1.31
CCDC60-203ENST00000536742 ARHGEF19Q8IW93 802 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 CCDC33Q8N5R6 958 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 POC1BQ8TC44 478 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 DNASE2BQ8WZ79 361 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 VCPIP1Q96JH7 1222 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 HEPHQ9BQS7 1158 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms