RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 SMOC2Q9H3U7 446 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 ABCB8Q9NUT2 735 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 CLUHO75153 1309 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 CYBBP04839 570 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 BMP1P13497 986 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 MNX1P50219 401 aaPredicted RBP8.29□□□□□ -1.08
ABCA4-207ENST00000536513 GALK1P51570 392 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 TRIM67Q6ZTA4 783 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 CAND1Q86VP6 1230 aaKnown RBP8.29□□□□□ -1.08
ABCA4-207ENST00000536513 CAMK1DQ8IU85 385 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 PSTKQ8IV42 348 aaKnown RBP8.29□□□□□ -1.08
ABCA4-207ENST00000536513 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.29□□□□□ -1.08
ABCA4-207ENST00000536513 OR52K2Q8NGK3 314 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 CKAP2Q8WWK9 683 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 TTC25Q96NG3 672 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 ZNF317Q96PQ6 595 aaPredicted RBP8.29□□□□□ -1.08
ABCA4-207ENST00000536513 QKIQ96PU8 341 aaKnown RBP eCLIP8.29□□□□□ -1.08
ABCA4-207ENST00000536513 TSSK1BQ9BXA7 367 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 GPR63Q9BZJ6 419 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 CCDC68Q9H2F9 335 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 ZDHHC6Q9H6R6 413 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 MTRRQ9UBK8 725 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 KRT38O76015 456 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 CD53P19397 219 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 PPM1AP35813 382 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 RECQLP46063 649 aaPredicted RBP8.29□□□□□ -1.08
ABCA4-207ENST00000536513 RENBPP51606 427 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 MPP1Q00013 466 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 KLHL38Q2WGJ6 581 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 C11orf91Q3C1V1 193 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 PPWD1Q96BP3 646 aaKnown RBP8.29□□□□□ -1.08
ABCA4-207ENST00000536513 TOX2Q96NM4 488 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 RAD9AQ99638 391 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 SCUBE2Q9NQ36 999 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 UBA2Q9UBT2 640 aaPredicted RBP8.29□□□□□ -1.08
ABCA4-207ENST00000536513 CD84Q9UIB8 345 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 AGO1Q9UL18 857 aaKnown RBP8.29□□□□□ -1.08
ABCA4-207ENST00000536513 TLR6Q9Y2C9 796 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 ARL5AQ9Y689 179 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 SQORQ9Y6N5 450 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 GVINP1Q7Z2Y8 2422 aa8.29□□□□□ -1.08
ABCA4-207ENST00000536513 AGRPO00253 132 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 STC2O76061 302 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 ALPIP09923 528 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 BGNP21810 368 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 DRG2P55039 364 aaKnown RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 ESRRGP62508 458 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 SLC12A1Q13621 1099 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 PARP6Q2NL67 630 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 PABPC1LQ4VXU2 614 aaKnown RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 HABP4Q5JVS0 413 aaKnown RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 TMEM240Q5SV17 173 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 TTC39BQ5VTQ0 682 aaPredicted RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 NAPEPLDQ6IQ20 393 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 ITIH5Q86UX2 942 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 RTL3Q8N8U3 475 aaKnown RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 C8orf48Q96LL4 319 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 TRAPPC9Q96Q05 1148 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 EPB41L4BQ9H329 900 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 EBF3Q9H4W6 596 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 CSNK1G1Q9HCP0 422 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 CLEC4EQ9ULY5 219 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 RP1L1Q8IWN7 2480 aaPredicted RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 DCLK1O15075 740 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 ALOX15BO15296 676 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 TBC1D4O60343 1298 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 SOX11P35716 441 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 CSKP41240 450 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 GNA12Q03113 381 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 TNK2Q07912 1038 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 MPP2Q14168 576 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 GRM2Q14416 872 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 RAB41Q5JT25 222 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 PM20D1Q6GTS8 502 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 GAREM2Q75VX8 874 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 KCNMB4Q86W47 210 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 ARID3BQ8IVW6 561 aaPredicted RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 PPHLN1Q8NEY8 458 aaKnown RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 OR13C4Q8NGS5 318 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 CENPIQ92674 756 aaPredicted RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 HDAC10Q969S8 669 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 CATSPER2Q96P56 530 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 TBL1YQ9BQ87 522 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 NKX2-4Q9H2Z4 354 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 TASP1Q9H6P5 420 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 ELAC1Q9H777 363 aaKnown RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 GLOD4Q9HC38 313 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 ARHGEF3Q9NR81 526 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 CHD9Q3L8U1 2897 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 DNAH14Q0VDD8 3507 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 TRAV19A0A0A6YYK7 116 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 KPNA3O00505 521 aaPredicted RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 PSMG1O95456 288 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 CLPTM1O96005 669 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 IGHA2P01877 340 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 SERPINF2P08697 491 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 TRIP4Q15650 581 aaPredicted RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 ZCCHC8Q6NZY4 707 aaKnown RBP8.28□□□□□ -1.08
ABCA4-207ENST00000536513 PHF21BQ96EK2 531 aa8.28□□□□□ -1.08
ABCA4-207ENST00000536513 TBATAQ96M53 351 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms