RNA–Protein interactions for RNA: ENST00000535765.5

VPS37B-203, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-203ENST00000535765 MFSD7Q6UXD7 560 aa23.62■■□□□ 1.37
VPS37B-203ENST00000535765 GCNT7Q6ZNI0 430 aa23.62■■□□□ 1.37
VPS37B-203ENST00000535765 BZW1Q7L1Q6 419 aaKnown RBP23.62■■□□□ 1.37
VPS37B-203ENST00000535765 ZSWIM9Q86XI8 627 aa23.62■■□□□ 1.37
VPS37B-203ENST00000535765 SPATS2Q86XZ4 545 aaKnown RBP23.62■■□□□ 1.37
VPS37B-203ENST00000535765 RCOR2Q8IZ40 523 aa23.62■■□□□ 1.37
VPS37B-203ENST00000535765 RNF25Q96BH1 459 aaPredicted RBP23.62■■□□□ 1.37
VPS37B-203ENST00000535765 BMFQ96LC9 184 aa23.62■■□□□ 1.37
VPS37B-203ENST00000535765 C1QTNF7Q9BXJ2 289 aa23.62■■□□□ 1.37
VPS37B-203ENST00000535765 POLR1EQ9GZS1 481 aaKnown RBP23.62■■□□□ 1.37
VPS37B-203ENST00000535765 LACRTQ9GZZ8 138 aa23.62■■□□□ 1.37
VPS37B-203ENST00000535765 NOD2Q9HC29 1040 aa23.62■■□□□ 1.37
VPS37B-203ENST00000535765 PCDH12Q9NPG4 1184 aa23.62■■□□□ 1.37
VPS37B-203ENST00000535765 GPR27Q9NS67 375 aa23.62■■□□□ 1.37
VPS37B-203ENST00000535765 A6NNZ2 444 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 ZRANB2O95218 330 aaKnown RBP eCLIP23.61■■□□□ 1.37
VPS37B-203ENST00000535765 TRIM16O95361 564 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 TOP3BO95985 862 aaKnown RBP23.61■■□□□ 1.37
VPS37B-203ENST00000535765 ITGAVP06756 1048 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 THEGLP0DJG4 465 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 CCNB1P14635 433 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 SPINK2P20155 84 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 MMP12P39900 470 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 NR2C2P49116 596 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 TFDP2Q14188 446 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 PDK1Q15118 436 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 KYAT3Q6YP21 454 aaKnown RBP23.61■■□□□ 1.37
VPS37B-203ENST00000535765 GLRX5Q86SX6 157 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 GATAD2AQ86YP4 633 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 CCDC13Q8IYE1 715 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 ACRBPQ8NEB7 543 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 EXD1Q8NHP7 514 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 CENPTQ96BT3 561 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 IFT43Q96FT9 208 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 GOLPH3Q9H4A6 298 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 APOBEC2Q9Y235 224 aaKnown RBP23.61■■□□□ 1.37
VPS37B-203ENST00000535765 DUSP10Q9Y6W6 482 aa23.61■■□□□ 1.37
VPS37B-203ENST00000535765 TOR1BO14657 336 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 FPGTO14772 594 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 HYAL3O43820 417 aaPredicted RBP23.6■■□□□ 1.37
VPS37B-203ENST00000535765 MMP20O60882 483 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 MAP3K6O95382 1288 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 FTH1P19P0C7X4 201 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 TNNT1P13805 278 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 ITIH2P19823 946 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 NFKBIAP25963 317 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 CLDN2P57739 230 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 SHBQ15464 509 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 TFDP3Q5H9I0 405 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 LRRC73Q5JTD7 316 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 KIAA1328Q86T90 577 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 RFX6Q8HWS3 928 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 CCNYQ8ND76 341 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 BAHD1Q8TBE0 780 aaPredicted RBP23.6■■□□□ 1.37
VPS37B-203ENST00000535765 KIAA1524Q8TCG1 905 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 OLFM3Q96PB7 478 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 SCNM1Q9BWG6 230 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 NT5MQ9NPB1 228 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 RBM22Q9NW64 420 aaKnown RBP eCLIP23.6■■□□□ 1.37
VPS37B-203ENST00000535765 WASF3Q9UPY6 502 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 HEY1Q9Y5J3 304 aa23.6■■□□□ 1.37
VPS37B-203ENST00000535765 COL5A1P20908 1838 aaPredicted RBP23.6■■□□□ 1.37
VPS37B-203ENST00000535765 RAD51BO15315 384 aa23.59■■□□□ 1.37
VPS37B-203ENST00000535765 EPHA8P29322 1005 aaPredicted RBP23.59■■□□□ 1.37
VPS37B-203ENST00000535765 RABIFP47224 123 aa23.59■■□□□ 1.37
VPS37B-203ENST00000535765 COPS2P61201 443 aa23.59■■□□□ 1.37
VPS37B-203ENST00000535765 MAXP61244 160 aa23.59■■□□□ 1.37
VPS37B-203ENST00000535765 SPOCD1Q6ZMY3 1216 aa23.59■■□□□ 1.37
VPS37B-203ENST00000535765 OR13H1Q8NG92 308 aa23.59■■□□□ 1.37
VPS37B-203ENST00000535765 RBM41Q96IZ5 413 aaKnown RBP23.59■■□□□ 1.37
VPS37B-203ENST00000535765 IL12RB2Q99665 862 aa23.59■■□□□ 1.37
VPS37B-203ENST00000535765 PHTF1Q9UMS5 762 aa23.59■■□□□ 1.37
VPS37B-203ENST00000535765 PPIL1Q9Y3C6 166 aa23.59■■□□□ 1.37
VPS37B-203ENST00000535765 PCDHGC4Q9Y5F7 938 aa23.59■■□□□ 1.37
VPS37B-203ENST00000535765 PCDHA3Q9Y5H8 950 aa23.59■■□□□ 1.37
VPS37B-203ENST00000535765 POM121BA6NF01 834 aa23.58■■□□□ 1.37
VPS37B-203ENST00000535765 PPP1R12AO14974 1030 aaPredicted RBP23.58■■□□□ 1.37
VPS37B-203ENST00000535765 TGM2P21980 687 aa23.58■■□□□ 1.37
VPS37B-203ENST00000535765 CTNNA1P35221 906 aaKnown RBP23.58■■□□□ 1.37
VPS37B-203ENST00000535765 IFI35P80217 286 aaPredicted RBP23.58■■□□□ 1.37
VPS37B-203ENST00000535765 KIF5AQ12840 1032 aa23.58■■□□□ 1.37
VPS37B-203ENST00000535765 PPP2R5EQ16537 467 aa23.58■■□□□ 1.37
VPS37B-203ENST00000535765 Q6ZSR6 202 aa23.58■■□□□ 1.37
VPS37B-203ENST00000535765 DPPA4Q7L190 304 aa23.58■■□□□ 1.37
VPS37B-203ENST00000535765 CHCHD4Q8N4Q1 142 aa23.58■■□□□ 1.37
VPS37B-203ENST00000535765 PNPLA1Q8N8W4 532 aa23.58■■□□□ 1.37
VPS37B-203ENST00000535765 SAP25Q8TEE9 199 aa23.58■■□□□ 1.37
VPS37B-203ENST00000535765 LGMNQ99538 433 aa23.58■■□□□ 1.37
VPS37B-203ENST00000535765 SEMA3CQ99985 751 aa23.58■■□□□ 1.37
VPS37B-203ENST00000535765 WRAP53Q9BUR4 548 aaKnown RBP23.58■■□□□ 1.37
VPS37B-203ENST00000535765 EFR3BQ9Y2G0 817 aa23.58■■□□□ 1.37
VPS37B-203ENST00000535765 TTC24A2A3L6 582 aaPredicted RBP23.57■■□□□ 1.36
VPS37B-203ENST00000535765 CCDC66A2RUB6 948 aa23.57■■□□□ 1.36
VPS37B-203ENST00000535765 LIG3P49916 1009 aa23.57■■□□□ 1.36
VPS37B-203ENST00000535765 NAP1L1P55209 391 aaKnown RBP23.57■■□□□ 1.36
VPS37B-203ENST00000535765 PFN3P60673 137 aa23.57■■□□□ 1.36
VPS37B-203ENST00000535765 YPEL5P62699 121 aa23.57■■□□□ 1.36
VPS37B-203ENST00000535765 PTAR1Q7Z6K3 402 aaPredicted RBP23.57■■□□□ 1.36
VPS37B-203ENST00000535765 PAF1Q8N7H5 531 aa23.57■■□□□ 1.36
VPS37B-203ENST00000535765 LRRC57Q8N9N7 239 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms