RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 MMP20O60882 483 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 GLB1P16278 677 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 CD82P27701 267 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 HTR1BP28222 390 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 TEAD1P28347 426 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 GKP32189 559 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 HCAR3P49019 387 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 INHBCP55103 352 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 RFTN1Q14699 578 aaPredicted RBP11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 CYTH1Q15438 398 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 CLEC16AQ2KHT3 1053 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 ALG11Q2TAA5 492 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 KLHL40Q2TBA0 621 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 C3orf38Q5JPI3 329 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 CERCAMQ5T4B2 595 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 ARHGAP40Q5TG30 622 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 TAF3Q5VWG9 929 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 PPP1R2P3Q6NXS1 205 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 ZNF438Q7Z4V0 828 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 GKN2Q86XP6 184 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 PSTKQ8IV42 348 aaKnown RBP11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 CXorf40AQ8TE69 158 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 SLC20A1Q8WUM9 679 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 TMEM74Q96NL1 305 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 PCDHB18PQ96TA0 734 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 CNPY3Q9BT09 278 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 SYT11Q9BT88 431 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 APOOQ9BUR5 198 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 KLC2Q9H0B6 622 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 CATSPERBQ9H7T0 1116 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 SAMSN1Q9NSI8 373 aaKnown RBP11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 ADAM22Q9P0K1 906 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 FZD10Q9ULW2 581 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 LRRK1Q38SD2 2015 aa11.31□□□□□ -0.6
CLSTN3-206ENST00000535668 TRAFD1O14545 582 aaPredicted RBP11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 MUSKO15146 869 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 BUB1O43683 1085 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 TNFSF15O95150 251 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 GPD1P21695 349 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 EPHB2P29323 1055 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 UGT1A5P35504 534 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 STAT1P42224 750 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 NSFP46459 744 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 SRP54P61011 504 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 RHOAP61586 193 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 IRF4Q15306 451 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 TAF1BQ53T94 588 aaPredicted RBP11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 EFHC2Q5JST6 749 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 ATXN7L2Q5T6C5 722 aaPredicted RBP11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 FAXCQ5TGI0 409 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 TMCO4Q5TGY1 634 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 RWDD4Q6NW29 188 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 CCDC81Q6ZN84 652 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 VPS36Q86VN1 386 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 CREBRFQ8IUR6 639 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 SLITRK4Q8IW52 837 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 RAVER1Q8IY67 606 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 OR6K2Q8NGY2 324 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 FNIP1Q8TF40 1166 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 COL26A1Q96A83 441 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 HMCESQ96FZ2 354 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 WDR92Q96MX6 357 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 ERGIC2Q96RQ1 377 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 MAGEB5Q9BZ81 275 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 SEMA4CQ9C0C4 833 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 STRADBQ9C0K7 418 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 STARD5Q9NSY2 213 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 RABGEF1Q9UJ41 708 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 MYO6Q9UM54 1294 aa11.3□□□□□ -0.6
CLSTN3-206ENST00000535668 USP9YO00507 2555 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 A0A1W2PQ67 120 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 A0A1W2PQC6 194 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 BUB1BO60566 1050 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 SFTPCP11686 197 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 ATP1A3P13637 1013 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 KELP23276 732 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 SLC5A2P31639 672 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 POLR2LP62875 67 aaKnown RBP11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 HLTFQ14527 1009 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 INPP5AQ14642 412 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 KRT31Q15323 416 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 ERAP2Q6P179 960 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 RAB11FIP2Q7L804 512 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 PCDH19Q8TAB3 1148 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 SLC30A5Q8TAD4 765 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 PSKH2Q96QS6 385 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 GFM1Q96RP9 751 aaKnown RBP11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 C11orf70Q9BRQ4 267 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 LRRN3Q9H3W5 708 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 PCDH12Q9NPG4 1184 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 ATP8A1Q9Y2Q0 1164 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 PCDHGA3Q9Y5H0 932 aa11.29□□□□□ -0.6
CLSTN3-206ENST00000535668 SPTAN1Q13813 2472 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 PDE2AO00408 941 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 HGSO14964 777 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 EPHB6O15197 1021 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 HTRA2O43464 458 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 GFPT2O94808 682 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 LIPCP11150 499 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms