RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ANKRD6Q9Y2G4 727 aa22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 RAI2Q9Y5P3 530 aa22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 A0A1W2PQ67 120 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 HACD1B0YJ81 288 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 RAD51BO15315 384 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 MMP20O60882 483 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 TJP3O95049 919 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 PGLSO95336 258 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 PAK4O96013 591 aaPredicted RBP22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 HNRNPA2B1P22626 353 aaKnown RBP22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 PTPN3P26045 913 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 CD38P28907 300 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 MMP12P39900 470 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 KIF19Q2TAC6 998 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 MEI1Q5TIA1 1274 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 ERAP2Q6P179 960 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 OR2I1PQ8NGU4 316 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 ACTL9Q8TC94 416 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 CXorf40AQ8TE69 158 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 PDCD6IPQ8WUM4 868 aaKnown RBP22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 ASB12Q8WXK4 309 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 RMDN1Q96DB5 314 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 MYOCQ99972 504 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 FZD3Q9NPG1 666 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 CDV3Q9UKY7 258 aaKnown RBP22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 PCDHB9Q9Y5E1 797 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 SHROOM3Q8TF72 1996 aa22.88■■□□□ 1.25
SFSWAP-204ENST00000535399 KNL1Q8NG31 2342 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 C4orf47A7E2U8 309 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 SLC30A4O14863 429 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 FZD6O60353 706 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 CPP00450 1065 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 MMP2P08253 660 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 AKT2P31751 481 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 POLR2LP62875 67 aaKnown RBP22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 OTUD4Q01804 1114 aaKnown RBP22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 SEMG2Q02383 582 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 WASHC5Q12768 1159 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 RALGDSQ12967 914 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 XRCC4Q13426 336 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 TEX44Q53QW1 395 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 SLC45A4Q5BKX6 768 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 ARMC12Q5T9G4 340 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 CCDC181Q5TID7 509 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 ADAT2Q7Z6V5 191 aaKnown RBP22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 MINDY1Q8N5J2 469 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 PAF1Q8N7H5 531 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 MFSD2AQ8NA29 543 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 AGAP3Q96P47 875 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 ALS2CR12Q96Q35 445 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 WRAP53Q9BUR4 548 aaKnown RBP22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 DLL3Q9NYJ7 618 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 SNX11Q9Y5W9 270 aa22.87■■□□□ 1.25
SFSWAP-204ENST00000535399 MTSS1O43312 755 aa22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 CTSKP43235 329 aa22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 ATXN3P54252 364 aaPredicted RBP22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 SKOR1P84550 965 aa22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 SGCGQ13326 291 aa22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 KLF1Q13351 362 aaPredicted RBP22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 STAT4Q14765 748 aa22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 PIH1D2Q8WWB5 315 aa22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 TEKT5Q96M29 485 aa22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 LENG8Q96PV6 779 aaPredicted RBP22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 KLF6Q99612 283 aaPredicted RBP22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 DNAAF2Q9NVR5 837 aaKnown RBP22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 PHTF1Q9UMS5 762 aa22.86■■□□□ 1.25
SFSWAP-204ENST00000535399 H7C0C1 242 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 TLR4O00206 839 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 TM7SF2O76062 418 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 PDHA1P08559 390 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 SDHBP21912 280 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 CD86P42081 329 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 ATP5OP48047 213 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 C21orf59P57076 290 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 CLDN2P57739 230 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 FAM193AP78312 1265 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 RPS6KA1Q15418 735 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 IL27RAQ6UWB1 636 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 GCNT7Q6ZNI0 430 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 DPPA4Q7L190 304 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 IQCHQ86VS3 1027 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 REXO1L1PQ8IX06 675 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 TRIM58Q8NG06 486 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 IMP4Q96G21 291 aaKnown RBP22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 FAM118BQ9BPY3 351 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 TDRD1Q9BXT4 1180 aaKnown RBP22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 C10orf88Q9H8K7 445 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 IL21RQ9HBE5 538 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 GLOD4Q9HC38 313 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 B4GALT6Q9UBX8 382 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 PPIL1Q9Y3C6 166 aa22.85■■□□□ 1.25
SFSWAP-204ENST00000535399 CFAP69A5D8W1 941 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 H0Y8X5 98 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 TM4SF5O14894 197 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 PRLP01236 227 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 C6P13671 934 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 CD68P34810 354 aaPredicted RBP22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 LIG3P49916 1009 aa22.84■■□□□ 1.25
SFSWAP-204ENST00000535399 NXPH1P58417 271 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms