RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 FSD1LQ9BXM9 530 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 TRIM8Q9BZR9 551 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 ARHGEF38Q9NXL2 777 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 CD300AQ9UGN4 299 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 MYRFQ9Y2G1 1151 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 PTGDR2Q9Y5Y4 395 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 LTBP3Q9NS15 1303 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 CARNS1A5YM72 827 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 NRP2O60462 931 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 HLA-DQB2P05538 268 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 ATP6V1B2P21281 511 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 SLC7A1P30825 629 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 PSMD8P48556 350 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 ADARP55265 1226 aaKnown RBP10.32□□□□□ -0.76
DDB1-204ENST00000535147 CDH13P55290 713 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 TMED1Q13445 227 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 RETREG3Q86VR2 466 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 ARHGAP12Q8IWW6 846 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 GPC2Q8N158 579 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 FIBCD1Q8N539 461 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 C2CD4AQ8NCU7 369 aaPredicted RBP10.32□□□□□ -0.76
DDB1-204ENST00000535147 RMND5BQ96G75 393 aaPredicted RBP10.32□□□□□ -0.76
DDB1-204ENST00000535147 HAUS8Q9BT25 410 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 MEAF6Q9HAF1 191 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 TIMMDC1Q9NPL8 285 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 EGFL7Q9UHF1 273 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 CROTQ9UKG9 612 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 PADI4Q9UM07 663 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 KCNH4Q9UQ05 1017 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 AURKCQ9UQB9 309 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 MYLKQ15746 1914 aa10.32□□□□□ -0.76
DDB1-204ENST00000535147 PPP6CO00743 305 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 CACNG3O60359 315 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 SRP72O76094 671 aaKnown RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 STT3AP46977 705 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 DNAJB13P59910 316 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 PLOD1Q02809 727 aaPredicted RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 PRKCQQ04759 706 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 DCTN2Q13561 401 aaKnown RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 XKR4Q5GH76 650 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 PM20D1Q6GTS8 502 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 TWF2Q6IBS0 349 aaKnown RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 DHFR2Q86XF0 187 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 FUNDC1Q8IVP5 155 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 RIN3Q8TB24 985 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 STON2Q8WXE9 905 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 EXT2Q93063 718 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 HSPBAP1Q96EW2 488 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 PGAP3Q96FM1 320 aaPredicted RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 FCRL5Q96RD9 977 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 SLC39A8Q9C0K1 460 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 TREX1Q9NSU2 369 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 RBM22Q9NW64 420 aaKnown RBP eCLIP10.31□□□□□ -0.76
DDB1-204ENST00000535147 KIAA1522Q9P206 1035 aaPredicted RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 SARDHQ9UL12 918 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 TRAF6Q9Y4K3 522 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 ARIH1Q9Y4X5 557 aaPredicted RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 A0A087X1B8 175 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 RBM47A0AV96 593 aaKnown RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 HHLA1C9JL84 531 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 DYNC1LI2O43237 492 aaPredicted RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 MAFKO60675 156 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 ANXA9O76027 345 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 SEC24DO94855 1032 aaPredicted RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 SUPT7LO94864 414 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 CLIC3O95833 236 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 F9P00740 461 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 ALDOCP09972 364 aaKnown RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 SOX11P35716 441 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 ETFBP38117 255 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 ALDH3B2P48448 385 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 PFKPQ01813 784 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 POU4F1Q01851 419 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 MAPRE2Q15555 327 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 ADRM1Q16186 407 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 NHSL2Q5HYW2 709 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 RAB41Q5JT25 222 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 DCLRE1AQ6PJP8 1040 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 C3orf58Q8NDZ4 430 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 RPL10LQ96L21 214 aaKnown RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 MRGPRX2Q96LB1 330 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 ALG9Q9H6U8 611 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 PNPLA3Q9NST1 481 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 DNAAF2Q9NVR5 837 aaKnown RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 TMEM181Q9P2C4 612 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 NUDT5Q9UKK9 219 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 NEU3Q9UQ49 428 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 TMX2-CTNND1H3BSU7 103 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 AP3B1O00203 1094 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 TREHO43280 583 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 MSI1O43347 362 aaKnown RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 FOXD2O60548 495 aaPredicted RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 CHRM3P20309 590 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 ADRA1AP35348 466 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 CDK9P50750 372 aaKnown RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 DUSP28Q4G0W2 176 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 PAN2Q504Q3 1202 aaKnown RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 SAMD4BQ5PRF9 694 aaKnown RBP10.31□□□□□ -0.76
DDB1-204ENST00000535147 PRAMEF19Q5SWL8 479 aa10.31□□□□□ -0.76
DDB1-204ENST00000535147 POTEHQ6S545 545 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms