RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 LHCGRP22888 699 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 MMP12P39900 470 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 MARCKSL1P49006 195 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 ARRB1P49407 418 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-215ENST00000533946 INSM1Q01101 510 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-215ENST00000533946 DSC2Q02487 901 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 IL10RBQ08334 325 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 ADCY2Q08462 1091 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 NIPAL4Q0D2K0 466 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 SGCGQ13326 291 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 INPP5AQ14642 412 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 MESDQ14696 234 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 LBRQ14739 615 aaKnown RBP9.7□□□□□ -0.86
SSBP3-215ENST00000533946 ALG11Q2TAA5 492 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 PERM1Q5SV97 790 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 HES3Q5TGS1 186 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 SPECC1LQ69YQ0 1117 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 LIPIQ6XZB0 460 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 MICALCLQ6ZW33 695 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 HSD11B1LQ7Z5J1 315 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 CCL4L1Q8NHW4 92 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 SLC35G2Q8TBE7 412 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 LMX1AQ8TE12 382 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 LENG8Q96PV6 779 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-215ENST00000533946 LRRC61Q9BV99 259 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 RETREG1Q9H6L5 497 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 MRPL47Q9HD33 250 aaKnown RBP9.7□□□□□ -0.86
SSBP3-215ENST00000533946 NT5MQ9NPB1 228 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 ABHD10Q9NUJ1 306 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 CTTNBP2NLQ9P2B4 639 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 B4GALT6Q9UBX8 382 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 IP6K2Q9UHH9 426 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 RABGEF1Q9UJ41 708 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 SALL4Q9UJQ4 1053 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 PLEKHM1Q9Y4G2 1056 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 PCYT1BQ9Y5K3 369 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-215ENST00000533946 KALRNO60229 2985 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 ADAMTS20P59510 1910 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 ARHGEF17Q96PE2 2063 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-215ENST00000533946 NPIPB15A6NHN6 443 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 AGRPO00253 132 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 FPGTO14772 594 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 TLX3O43711 291 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 MFAP3LO75121 409 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 RFPL3O75679 317 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 TM7SF2O76062 418 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 RECQL5O94762 991 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 TRIM16O95361 564 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 CSF2P04141 144 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 TNNT1P13805 278 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 NME1P15531 152 aaKnown RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 JUNDP17535 347 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 NOP2P46087 812 aaKnown RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 POLD2P49005 469 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 GEMIN4P57678 1058 aaKnown RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 HNRNPDQ14103 355 aaKnown RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 PIGHQ14442 188 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 CNGA3Q16281 694 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 SLC18A3Q16572 532 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 CDKN3Q16667 212 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 BOLA3Q53S33 107 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 SLC45A4Q5BKX6 768 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 ANKRD20A8PQ5CZ79 823 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 DENND2CQ68D51 928 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 GUSBP11Q6P575 273 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 TMCO3Q6UWJ1 677 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 RD3Q7Z3Z2 195 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 TC2NQ8N9U0 490 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 OR8K1Q8NGG5 319 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 OR4C6Q8NH72 309 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 CXorf40AQ8TE69 158 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 PDCD6IPQ8WUM4 868 aaKnown RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 TEKT4Q8WW24 435 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 OR1E3Q8WZA6 343 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 PDXPQ96GD0 296 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 LRIG1Q96JA1 1093 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 PSKH2Q96QS6 385 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 AGAP2Q99490 1192 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 NCAPGQ9BPX3 1015 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 HERPUD2Q9BSE4 406 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 CINPQ9BW66 212 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 OSBPL1AQ9BXW6 950 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 SUDS3Q9H7L9 328 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 NHEJ1Q9H9Q4 299 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 TMEM51Q9NW97 253 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 SAE1Q9UBE0 346 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 CD84Q9UIB8 345 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 ATP8A1Q9Y2Q0 1164 aa9.69□□□□□ -0.86
SSBP3-215ENST00000533946 BZW2Q9Y6E2 419 aaKnown RBP9.69□□□□□ -0.86
SSBP3-215ENST00000533946 CXorf51AA0A1B0GTR3 108 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 MYO1FO00160 1098 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 YY2O15391 372 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 HTRA2O43464 458 aaPredicted RBP9.68□□□□□ -0.86
SSBP3-215ENST00000533946 DFNA5O60443 496 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 PRLP01236 227 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 HLA-DQB2P05538 268 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 MMP2P08253 660 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 TSHRP16473 764 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 CKMT2P17540 419 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 TGM2P21980 687 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms