RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ZNF839A8K0R7 811 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 PSMD12O00232 456 aaPredicted RBP19.46■□□□□ 0.71
CAPN1-226ENST00000533820 FBP2O00757 339 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 UBDO15205 165 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 CXCR3P49682 368 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 EMP3P54852 163 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 BEX3Q00994 111 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 TICAM1Q8IUC6 712 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 TOP6BLQ8N6T0 577 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 TRIML2Q8N7C3 387 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 SPPL2BQ8TCT7 592 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 GAB3Q8WWW8 586 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 SLC9A7Q96T83 725 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 TMED5Q9Y3A6 229 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 ARHGEF37A1IGU5 675 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 AP1G1O43747 822 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 SLC4A1P02730 911 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 CPB1P15086 417 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 PORP16435 677 aaPredicted RBP19.45■□□□□ 0.7
CAPN1-226ENST00000533820 SH3BGRP55822 239 aaPredicted RBP19.45■□□□□ 0.7
CAPN1-226ENST00000533820 DENND5AQ6IQ26 1287 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 TMEM214Q6NUQ4 689 aaKnown RBP19.45■□□□□ 0.7
CAPN1-226ENST00000533820 CCT7Q99832 543 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 OTOFQ9HC10 1997 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 PLOD2O00469 737 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 TADA2AO75478 443 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 UGT1A6P19224 532 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 CACNB2Q08289 660 aaPredicted RBP19.45■□□□□ 0.7
CAPN1-226ENST00000533820 DCTN2Q13561 401 aaKnown RBP19.45■□□□□ 0.7
CAPN1-226ENST00000533820 TRIM25Q14258 630 aaKnown RBP19.45■□□□□ 0.7
CAPN1-226ENST00000533820 REP15Q6BDI9 236 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 LINC00523Q86TU6 105 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 HERC6Q8IVU3 1022 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 SH3RF2Q8TEC5 729 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 TMEM79Q9BSE2 394 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 MRPS26Q9BYN8 205 aaKnown RBP19.45■□□□□ 0.7
CAPN1-226ENST00000533820 SENP6Q9GZR1 1112 aaPredicted RBP19.45■□□□□ 0.7
CAPN1-226ENST00000533820 ADARB2Q9NS39 739 aaKnown RBP19.45■□□□□ 0.7
CAPN1-226ENST00000533820 CROTQ9UKG9 612 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 RNF11Q9Y3C5 154 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 SLCO1B7G3V0H7 640 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 KCNE1P15382 129 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 ZNF26P17031 533 aaPredicted RBP19.45■□□□□ 0.7
CAPN1-226ENST00000533820 ARCN1P48444 511 aaKnown RBP19.45■□□□□ 0.7
CAPN1-226ENST00000533820 UGP2Q16851 508 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 GEN1Q17RS7 908 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 FAM83EQ2M2I3 478 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 FBXO48Q5FWF7 155 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 BTBD8Q5XKL5 378 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 NEPROQ6NW34 567 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 CATSPER1Q8NEC5 780 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 SLC39A8Q9C0K1 460 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 CNGB3Q9NQW8 809 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 CACNA2D2Q9NY47 1150 aa19.45■□□□□ 0.7
CAPN1-226ENST00000533820 FAM149AA5PLN7 773 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 SAC3D1A6NKF1 404 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 TRPC5OSA6NMA1 111 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 PDHXO00330 501 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 HLA-DQB2P05538 268 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 PGFP49763 221 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 SCAPQ12770 1279 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 CUZD1Q86UP6 607 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 ZNF354CQ86Y25 554 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 AHI1Q8N157 1196 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 OR6P1Q8NGX9 317 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 RSPH1Q8WYR4 309 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 LRCH3Q96II8 777 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 GLOD4Q9HC38 313 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 RGS17Q9UGC6 210 aaPredicted RBP19.44■□□□□ 0.7
CAPN1-226ENST00000533820 AURKCQ9UQB9 309 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 TMA7Q9Y2S6 64 aaKnown RBP19.44■□□□□ 0.7
CAPN1-226ENST00000533820 OR51F1A6NGY5 319 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 RRN3P2A6NIE6 340 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 MRASO14807 208 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 SUPT7LO94864 414 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 KRT80Q6KB66 452 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 DQX1Q8TE96 717 aaKnown RBP19.44■□□□□ 0.7
CAPN1-226ENST00000533820 ANKRD49Q8WVL7 239 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 VAT1Q99536 393 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 ALG9Q9H6U8 611 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 PTTG2Q9NZH5 202 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 NDUFA13Q9P0J0 144 aa19.44■□□□□ 0.7
CAPN1-226ENST00000533820 AAR2Q9Y312 384 aaKnown RBP19.44■□□□□ 0.7
CAPN1-226ENST00000533820 A8MT66 165 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 SEC24DO94855 1032 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-226ENST00000533820 ATP5F1P24539 256 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-226ENST00000533820 SLC5A2P31639 672 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 ETFBP38117 255 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 HADHAP40939 763 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 SLC7A2P52569 658 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 NAA20P61599 178 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 PIWIL4Q7Z3Z4 852 aaKnown RBP19.43■□□□□ 0.7
CAPN1-226ENST00000533820 PIM3Q86V86 326 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 SLC7A5P1Q8MH63 180 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 PPP1R14BQ96C90 147 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 RPL10LQ96L21 214 aaKnown RBP19.43■□□□□ 0.7
CAPN1-226ENST00000533820 MRPL57Q9BQC6 102 aaKnown RBP19.43■□□□□ 0.7
CAPN1-226ENST00000533820 MIOSQ9NXC5 875 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 NSMCE4AQ9NXX6 385 aa19.43■□□□□ 0.7
CAPN1-226ENST00000533820 TCAF1Q9Y4C2 921 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms