RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 C6P13671 934 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 HTR1BP28222 390 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 PEX5P50542 639 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 BLKP51451 505 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 SEMG2Q02383 582 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 PPARDQ03181 441 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 C1orf61Q13536 156 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 ZNF235Q14590 738 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 LBRQ14739 615 aaKnown RBP15.56■□□□□ 0.08
CPSF1-211ENST00000533492 IRF4Q15306 451 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 WSCD2Q2TBF2 565 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 DEFB133Q30KQ1 61 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 PRRT3Q5FWE3 981 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 TMCO4Q5TGY1 634 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 ALKBH5Q6P6C2 394 aaKnown RBP15.56■□□□□ 0.08
CPSF1-211ENST00000533492 MACC1Q6ZN28 852 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 PHACTR4Q8IZ21 702 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 RBFAQ8N0V3 343 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 BBS5Q8N3I7 341 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 NSMCE1Q8WV22 266 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 HNRNPLLQ8WVV9 542 aaKnown RBP15.56■□□□□ 0.08
CPSF1-211ENST00000533492 GLMNQ92990 594 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 BTBD6Q96KE9 485 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 ZNF599Q96NL3 588 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 SALL4Q9UJQ4 1053 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.56■□□□□ 0.08
CPSF1-211ENST00000533492 CPED1A4D0V7 1026 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 TPP1O14773 563 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 OPA1O60313 960 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 CYP1A2P05177 515 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 GP1BAP07359 652 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 ANXA6P08133 673 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 CTSEP14091 401 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 TCF4P15884 667 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 SERPINB6P35237 376 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 MMP12P39900 470 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 ADKP55263 362 aaKnown RBP15.55■□□□□ 0.08
CPSF1-211ENST00000533492 AP1S1P61966 158 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 SLC10A7Q0GE19 358 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 KRT81Q14533 505 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 INPP5AQ14642 412 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 HADHQ16836 314 aaKnown RBP15.55■□□□□ 0.08
CPSF1-211ENST00000533492 ZSCAN23Q3MJ62 389 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 ZSWIM9Q86XI8 627 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 TP53INP2Q8IXH6 220 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 NIPA2Q8N8Q9 360 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 DCBLD1Q8N8Z6 715 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 IFI44Q8TCB0 444 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 TEKT4Q8WW24 435 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 CSPG4P5Q96PW8 444 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 PSKH2Q96QS6 385 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 TCEAL2Q9H3H9 227 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-211ENST00000533492 DOLKQ9UPQ8 538 aa15.55■□□□□ 0.08
CPSF1-211ENST00000533492 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-211ENST00000533492 CFAP69A5D8W1 941 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 GYPCP04921 128 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 ELFN1P0C7U0 828 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 CASP14P31944 242 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 HSPA9P38646 679 aaKnown RBP15.54■□□□□ 0.08
CPSF1-211ENST00000533492 RPIAP49247 311 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 RTP5Q14D33 572 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 CDKN3Q16667 212 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 TXNRD3NBQ6F5E7 133 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 ENPP7Q6UWV6 458 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 HID1Q8IV36 788 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 ATPAF2Q8N5M1 289 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 ATL2Q8NHH9 583 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 MAPK15Q8TD08 544 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 SCG3Q8WXD2 468 aaKnown RBP15.54■□□□□ 0.08
CPSF1-211ENST00000533492 ECHDC3Q96DC8 303 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 TBATAQ96M53 351 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 DCBLD2Q96PD2 775 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 APOOQ9BUR5 198 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 PCDH18Q9HCL0 1135 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 ETNK2Q9NVF9 386 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 ANKRD36A6QL64 1941 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 ADAMTS20P59510 1910 aa15.54■□□□□ 0.08
CPSF1-211ENST00000533492 LRRK1Q38SD2 2015 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 ZFHX4Q86UP3 3567 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 LY6G6EA0A0G2JKS1 128 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 A0A1W2PQ67 120 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 A8MX80 341 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 LMO7DNF2Z398 122 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 MUSKO15146 869 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 GCATO75600 419 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 PCCBP05166 539 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 TSHRP16473 764 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 NFKBIAP25963 317 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 CDH6P55285 790 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 NFATC4Q14934 902 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 AGERQ15109 404 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 ELOCQ15369 112 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 NR0B2Q15466 257 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 COL28A1Q2UY09 1125 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 SKOR2Q2VWA4 1001 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-211ENST00000533492 LIPIQ6XZB0 460 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 EFL1Q7Z2Z2 1120 aaKnown RBP15.53■□□□□ 0.08
CPSF1-211ENST00000533492 RD3Q7Z3Z2 195 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 FSTL5Q8N475 847 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-211ENST00000533492 ZNF564Q8TBZ8 553 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms