RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 FAM151BQ6UXP7 276 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 SMAD5Q99717 465 aaKnown RBP17.64■□□□□ 0.41
PHRF1-205ENST00000533464 PLK2Q9NYY3 685 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 HMGXB4Q9UGU5 601 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 LGALS13Q9UHV8 139 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 MRPS23Q9Y3D9 190 aaKnown RBP17.64■□□□□ 0.41
PHRF1-205ENST00000533464 SPEF2Q9C093 1822 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 TRIM38O00635 465 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 CLDN11O75508 207 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 ADH1AP07327 375 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 CES1P23141 567 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 MPSTP25325 297 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 L1CAMP32004 1257 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 HPCAL1P37235 193 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 HK2P52789 917 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 RPL38P63173 70 aaKnown RBP17.64■□□□□ 0.41
PHRF1-205ENST00000533464 PAGE2BQ5JRK9 111 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 IRGQQ8WZA9 623 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 PPP3R2Q96LZ3 170 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 FBXL18Q96ME1 805 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 GBA3Q9H227 469 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 IGFLR1Q9H665 355 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 ACSS2Q9NR19 701 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 TMCO1Q9UM00 188 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 TRAF6Q9Y4K3 522 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 PIGRP01833 764 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 PREPLQ4J6C6 727 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-205ENST00000533464 ZNF572Q7Z3I7 529 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-205ENST00000533464 TAC4Q86UU9 113 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 FITM2Q8N6M3 262 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 TERB1Q8NA31 727 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 STARD8Q92502 1023 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 ZFRQ96KR1 1074 aaKnown RBP17.64■□□□□ 0.41
PHRF1-205ENST00000533464 DCUN1D5Q9BTE7 237 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 TRAFD1O14545 582 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-205ENST00000533464 FAM20BO75063 409 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 GABRR2P28476 465 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 SEMA5AQ13591 1074 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 CPSF6Q16630 551 aaKnown RBP eCLIP17.63■□□□□ 0.41
PHRF1-205ENST00000533464 CLVS1Q8IUQ0 354 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-205ENST00000533464 MAGEE2Q8TD90 523 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-205ENST00000533464 SLC12A4Q9UP95 1085 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 NRXN3Q9Y4C0 1643 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-205ENST00000533464 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-205ENST00000533464 RABGGTBP53611 331 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 ZDHHC24Q6UX98 284 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 PLEKHM3Q6ZWE6 761 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 CUZD1Q86UP6 607 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 FAXDC2Q96IV6 333 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 VPS51Q9UID3 782 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 RECQL5O94762 991 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-205ENST00000533464 OTCP00480 354 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 SPATA31D3P0C874 917 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 RHOQP17081 205 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 DAOAP59103 153 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 NAA20P61599 178 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 SMARCB1Q12824 385 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 CA9Q16790 459 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 SPATA31D4Q6ZUB0 917 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 FIBCD1Q8N539 461 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 OR4K2Q8NGD2 314 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 RSPH1Q8WYR4 309 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 DEFB118Q96PH6 123 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 BBS4Q96RK4 519 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 COPS8Q99627 209 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 SLC4A5Q9BY07 1137 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 KRCC1Q9NPI7 259 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-205ENST00000533464 DUSP12Q9UNI6 340 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 SNX10Q9Y5X0 201 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 ANXA6P08133 673 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 LRRC15Q8TF66 581 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 CLEC4CQ8WTT0 213 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 ATL1Q8WXF7 558 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 LPIN3Q9BQK8 851 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 TRMOQ9BU70 441 aa17.63■□□□□ 0.41
PHRF1-205ENST00000533464 DDX18Q9NVP1 670 aaKnown RBP17.63■□□□□ 0.41
PHRF1-205ENST00000533464 DUOX1Q9NRD9 1551 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 YJEFN3A6XGL0 299 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 CFHP08603 1231 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 HPGDP15428 266 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 CCNCP24863 283 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 HOXD13P35453 343 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 KRT20P35900 424 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 MRPL28Q13084 256 aaKnown RBP17.62■□□□□ 0.41
PHRF1-205ENST00000533464 PARP15Q460N3 678 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 TXNDC11Q6PKC3 985 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 ZNF513Q8N8E2 541 aaPredicted RBP17.62■□□□□ 0.41
PHRF1-205ENST00000533464 GSTCDQ8NEC7 633 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 PTCD3Q96EY7 689 aaKnown RBP17.62■□□□□ 0.41
PHRF1-205ENST00000533464 MCRS1Q96EZ8 462 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 APOL4Q9BPW4 351 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 ZNF180Q9UJW8 692 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 RFWD3Q6PCD5 774 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 METTL3Q86U44 580 aaKnown RBP17.62■□□□□ 0.41
PHRF1-205ENST00000533464 MAGEC3Q8TD91 643 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 NXNL1Q96CM4 212 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 HIPK3Q9H422 1215 aa17.62■□□□□ 0.41
PHRF1-205ENST00000533464 RPL26L1Q9UNX3 145 aaKnown RBP17.62■□□□□ 0.41
PHRF1-205ENST00000533464 C1RP00736 705 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms