RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 AQP9O43315 295 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 TLX3O43711 291 aaPredicted RBP11.41□□□□□ -0.58
CLCF1-202ENST00000533438 OPA1O60313 960 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 BUB1BO60566 1050 aaPredicted RBP11.41□□□□□ -0.58
CLCF1-202ENST00000533438 LRCH4O75427 683 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 MT-CO3P00414 261 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 SKILP12757 684 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 MYF5P13349 255 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 JUNDP17535 347 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 ERCC2P18074 760 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 CSNK1DP48730 415 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 HCAR3P49019 387 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 PTK2BQ14289 1009 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 AGERQ15109 404 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 UGP2Q16851 508 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 ASTE1Q2TB18 679 aaPredicted RBP11.41□□□□□ -0.58
CLCF1-202ENST00000533438 TDRD12Q587J7 1177 aaKnown RBP11.41□□□□□ -0.58
CLCF1-202ENST00000533438 ZCCHC8Q6NZY4 707 aaKnown RBP11.41□□□□□ -0.58
CLCF1-202ENST00000533438 MACC1Q6ZN28 852 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 VPS36Q86VN1 386 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 ZSWIM9Q86XI8 627 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 CCDC170Q8IYT3 715 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 RBFAQ8N0V3 343 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 NPWQ8N729 165 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 TSEN2Q8NCE0 465 aaKnown RBP11.41□□□□□ -0.58
CLCF1-202ENST00000533438 BTN2A2Q8WVV5 523 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 ZNF653Q96CK0 615 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 ZNF641Q96N77 438 aaPredicted RBP11.41□□□□□ -0.58
CLCF1-202ENST00000533438 TUBGCP5Q96RT8 1024 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 UBL7Q96S82 380 aaPredicted RBP11.41□□□□□ -0.58
CLCF1-202ENST00000533438 CHP1Q99653 195 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 WRAP53Q9BUR4 548 aaKnown RBP11.41□□□□□ -0.58
CLCF1-202ENST00000533438 C1QTNF7Q9BXJ2 289 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 TCEAL2Q9H3H9 227 aaPredicted RBP11.41□□□□□ -0.58
CLCF1-202ENST00000533438 NHEJ1Q9H9Q4 299 aaPredicted RBP11.41□□□□□ -0.58
CLCF1-202ENST00000533438 COQ6Q9Y2Z9 468 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 SCINQ9Y6U3 715 aa11.41□□□□□ -0.58
CLCF1-202ENST00000533438 ASXL3Q9C0F0 2248 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 SHROOM3Q8TF72 1996 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 RIOK3O14730 519 aaKnown RBP11.4□□□□□ -0.58
CLCF1-202ENST00000533438 ARHGAP6O43182 974 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 PRPSAP2O60256 369 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 LZTS3O60299 673 aaPredicted RBP11.4□□□□□ -0.58
CLCF1-202ENST00000533438 GCATO75600 419 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 MYBL1P10243 752 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 C6P13671 934 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 PCK1P35558 622 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 EIF4A3P38919 411 aaKnown RBP11.4□□□□□ -0.58
CLCF1-202ENST00000533438 MMP12P39900 470 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 DUSP3P51452 185 aaPredicted RBP11.4□□□□□ -0.58
CLCF1-202ENST00000533438 ZNF135P52742 658 aaPredicted RBP11.4□□□□□ -0.58
CLCF1-202ENST00000533438 THOP1P52888 689 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 SEMG2Q02383 582 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 IL10RBQ08334 325 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 NSUN2Q08J23 767 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLCF1-202ENST00000533438 DPYSQ14117 519 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 IRF4Q15306 451 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 BRAT1Q6PJG6 821 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 ARHGAP36Q6ZRI8 547 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 SRLQ86TD4 932 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 CAMK1DQ8IU85 385 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 PHACTR4Q8IZ21 702 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 LMX1AQ8TE12 382 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 ECHDC3Q96DC8 303 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 TRIM11Q96F44 468 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 LRRC61Q9BV99 259 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 BOCQ9BWV1 1114 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 PRORYQ9H606 182 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 MRPL47Q9HD33 250 aaKnown RBP11.4□□□□□ -0.58
CLCF1-202ENST00000533438 PCDH12Q9NPG4 1184 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 CWC15Q9P013 229 aaKnown RBP11.4□□□□□ -0.58
CLCF1-202ENST00000533438 SPASTQ9UBP0 616 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 APOBEC3BQ9UH17 382 aaKnown RBP11.4□□□□□ -0.58
CLCF1-202ENST00000533438 SALL4Q9UJQ4 1053 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 PCDHB1Q9Y5F3 818 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 AK5Q9Y6K8 562 aa11.4□□□□□ -0.58
CLCF1-202ENST00000533438 EME2A4GXA9 379 aaPredicted RBP11.39□□□□□ -0.59
CLCF1-202ENST00000533438 SOWAHDA6NJG2 315 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 MUSKO15146 869 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 DAPK3O43293 454 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 PALMO75781 387 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 TCF4P15884 667 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 XPAP23025 273 aaPredicted RBP11.39□□□□□ -0.59
CLCF1-202ENST00000533438 IL1R2P27930 398 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 EIF2S3P41091 472 aaKnown RBP11.39□□□□□ -0.59
CLCF1-202ENST00000533438 PEX5P50542 639 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 RP1P56715 2156 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 C19orf57Q0VDD7 668 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 RFTN1Q14699 578 aaPredicted RBP11.39□□□□□ -0.59
CLCF1-202ENST00000533438 LRRC14Q15048 493 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 DPYSL2Q16555 572 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 WSCD2Q2TBF2 565 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 DEFB133Q30KQ1 61 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 PRRT3Q5FWE3 981 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 PPP6R3Q5H9R7 873 aaPredicted RBP11.39□□□□□ -0.59
CLCF1-202ENST00000533438 GUSBP11Q6P575 273 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 RAD9BQ6WBX8 426 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 TP53INP2Q8IXH6 220 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 LZTR1Q8N653 840 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 SNIP1Q8TAD8 396 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms