RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PECAM1P16284 738 aaPredicted RBP20.6■□□□□ 0.89
CCS-208ENST00000533244 XPAP23025 273 aaPredicted RBP20.6■□□□□ 0.89
CCS-208ENST00000533244 POLR2LP62875 67 aaKnown RBP20.6■□□□□ 0.89
CCS-208ENST00000533244 IHHQ14623 411 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 DBX2Q6ZNG2 339 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 SPATS2Q86XZ4 545 aaKnown RBP20.6■□□□□ 0.89
CCS-208ENST00000533244 ARRDC2Q8TBH0 407 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 FAM174AQ8TBP5 190 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 CXorf40AQ8TE69 158 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 MYOCQ99972 504 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 SEMA3CQ99985 751 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 ERVMER34-1Q9H9K5 563 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 GPR27Q9NS67 375 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 TM7SF3Q9NS93 570 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 PCDHGB2Q9Y5G2 931 aa20.6■□□□□ 0.89
CCS-208ENST00000533244 LRRK1Q38SD2 2015 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 KCNK1O00180 336 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 FZD6O60353 706 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 DFNA5O60443 496 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 MAGEC1O60732 1142 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 MMP20O60882 483 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 CES1P23141 567 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 PTPN7P35236 360 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 CCZ1BP86790 482 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 CCZ1P86791 482 aaPredicted RBP20.59■□□□□ 0.89
CCS-208ENST00000533244 RALGDSQ12967 914 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 ZBTB17Q13105 803 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 KAZNQ674X7 775 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 ERAP2Q6P179 960 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 KYAT3Q6YP21 454 aaKnown RBP20.59■□□□□ 0.89
CCS-208ENST00000533244 BBS12Q6ZW61 710 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 BZW1Q7L1Q6 419 aaKnown RBP20.59■□□□□ 0.89
CCS-208ENST00000533244 SYCE1Q8N0S2 351 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 RNF10Q8N5U6 811 aaKnown RBP20.59■□□□□ 0.89
CCS-208ENST00000533244 CNTD1Q8N815 330 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 ALG3Q92685 438 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 BMFQ96LC9 184 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 ELF4Q99607 663 aaPredicted RBP20.59■□□□□ 0.89
CCS-208ENST00000533244 GDF3Q9NR23 364 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 HAUS2Q9NVX0 235 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 EFR3BQ9Y2G0 817 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 CAPN6Q9Y6Q1 641 aa20.59■□□□□ 0.89
CCS-208ENST00000533244 SPTBN2O15020 2390 aa20.58■□□□□ 0.89
CCS-208ENST00000533244 A0A1B0GTQ1 180 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 CFAP69A5D8W1 941 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 GOLGA6L3A6NEY3 463 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 KCNK3O14649 394 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 TM7SF2O76062 418 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 PRKCGP05129 697 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 RWDD2BP57060 319 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 CLDN2P57739 230 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 DSC2Q02487 901 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 SGCGQ13326 291 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 AGERQ15109 404 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 PRKD1Q15139 912 aaPredicted RBP20.58■□□□□ 0.88
CCS-208ENST00000533244 LLGL1Q15334 1064 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 DPPA4Q7L190 304 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 CCDC50Q8IVM0 306 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 OR13H1Q8NG92 308 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 CENPTQ96BT3 561 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 KLHDC7BQ96G42 594 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 HERPUD2Q9BSE4 406 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 WRAP53Q9BUR4 548 aaKnown RBP20.58■□□□□ 0.88
CCS-208ENST00000533244 TSGA10Q9BZW7 698 aa20.58■□□□□ 0.88
CCS-208ENST00000533244 SAE1Q9UBE0 346 aaPredicted RBP20.58■□□□□ 0.88
CCS-208ENST00000533244 POM121BA6NF01 834 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 A6NNZ2 444 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 PCDHGA12O60330 932 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 KCNK5O95279 499 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 PGLSO95336 258 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 CPP00450 1065 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 JCHAINP01591 159 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 THEGLP0DJG4 465 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 CCT8P50990 548 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 NIPAL4Q0D2K0 466 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 AP1B1Q10567 949 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 SHBQ15464 509 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 ZNF662Q6ZS27 426 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 PEX26Q7Z412 305 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 AMFRQ9UKV5 643 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 PPIL1Q9Y3C6 166 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 PCDHB9Q9Y5E1 797 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 RAI2Q9Y5P3 530 aa20.57■□□□□ 0.88
CCS-208ENST00000533244 MIF4GDA9UHW6 222 aaKnown RBP20.56■□□□□ 0.88
CCS-208ENST00000533244 C6P13671 934 aa20.56■□□□□ 0.88
CCS-208ENST00000533244 RXRGP48443 463 aa20.56■□□□□ 0.88
CCS-208ENST00000533244 LIG3P49916 1009 aa20.56■□□□□ 0.88
CCS-208ENST00000533244 ITKQ08881 620 aa20.56■□□□□ 0.88
CCS-208ENST00000533244 PPM1JQ5JR12 505 aa20.56■□□□□ 0.88
CCS-208ENST00000533244 SLC22A18ASQ8N1D0 253 aa20.56■□□□□ 0.88
CCS-208ENST00000533244 OXR1Q8N573 874 aa20.56■□□□□ 0.88
CCS-208ENST00000533244 TP53I13Q8NBR0 393 aaPredicted RBP20.56■□□□□ 0.88
CCS-208ENST00000533244 P3H4Q92791 437 aa20.56■□□□□ 0.88
CCS-208ENST00000533244 MCCC1Q96RQ3 725 aaPredicted RBP20.56■□□□□ 0.88
CCS-208ENST00000533244 TDRD1Q9BXT4 1180 aaKnown RBP20.56■□□□□ 0.88
CCS-208ENST00000533244 OSBPL8Q9BZF1 889 aa20.56■□□□□ 0.88
CCS-208ENST00000533244 PHTF1Q9UMS5 762 aa20.56■□□□□ 0.88
CCS-208ENST00000533244 PCNX2A6NKB5 2137 aa20.56■□□□□ 0.88
CCS-208ENST00000533244 APOC4-APOC2K7ER74 178 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 FPGTO14772 594 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms