RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 GDPD4Q6W3E5 623 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 B4GALNT4Q76KP1 1039 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 PARS2Q7L3T8 475 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 ZC3H18Q86VM9 953 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 OXR1Q8N573 874 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 CARD9Q9H257 536 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 GDF3Q9NR23 364 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 LHX3Q9UBR4 397 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 ANGPTL2Q9UKU9 493 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 ZFR2Q9UPR6 939 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 EFR3BQ9Y2G0 817 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 ZKSCAN5Q9Y2L8 839 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 HS3ST3A1Q9Y663 406 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 CTAGE9A4FU28 777 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 APOC4-APOC2K7ER74 178 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 AREL1O15033 823 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 PCDH8O95206 1070 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 APOC2P02655 101 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 ATP1A1P05023 1023 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 UGT2B4P06133 528 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 HNRNPA2B1P22626 353 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 MAT2AP31153 395 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 ARRB1P49407 418 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 SIM1P81133 766 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 OTUD4Q01804 1114 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 ITKQ08881 620 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 ATXN7L2Q5T6C5 722 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 MARC1Q5VT66 337 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 CCDC13Q8IYE1 715 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 PAF1Q8N7H5 531 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 TTC13Q8NBP0 860 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 OR6K2Q8NGY2 324 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 TFB1MQ8WVM0 346 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 ZNF641Q96N77 438 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 KLHL32Q96NJ5 620 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 ZNF599Q96NL3 588 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 LENG8Q96PV6 779 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 TUBGCP5Q96RT8 1024 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 WDR24Q96S15 920 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 LGMNQ99538 433 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 CDC6Q99741 560 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 NAPGQ99747 312 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 FAM118BQ9BPY3 351 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 HERPUD2Q9BSE4 406 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 C1QTNF2Q9BXJ5 285 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 SLC17A9Q9BYT1 436 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 BRD8Q9H0E9 1235 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 KCND1Q9NSA2 647 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 HAUS2Q9NVX0 235 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 SEPT3Q9UH03 358 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 TTLL3Q9Y4R7 772 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 PCDHB9Q9Y5E1 797 aa13.07□□□□□ -0.32
TRAPPC4-212ENST00000533058 TSPAN11A1L157 253 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 MATN3O15232 486 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 FGGP02679 453 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 CCNCP24863 283 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 CASQ1P31415 396 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 AKT2P31751 481 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 GKP32189 559 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 GRK6P43250 576 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 MMP13P45452 471 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 RENBPP51606 427 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 EIF3EP60228 445 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 FAM193AP78312 1265 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 LONRF2Q1L5Z9 754 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 INAVAQ3KP66 663 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 DARS2Q6PI48 645 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 ABI3BPQ7Z7G0 1075 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 SPATS2Q86XZ4 545 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 SLC13A5Q86YT5 568 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 DCP2Q8IU60 420 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 ACTL9Q8TC94 416 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 SAP25Q8TEE9 199 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 SPOCK2Q92563 424 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 HDAC11Q96DB2 347 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 KLHDC7BQ96G42 594 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 PBKQ96KB5 322 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 EXOC2Q96KP1 924 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 CAMK1GQ96NX5 476 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 TSGA13Q96PP4 275 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 PSKH2Q96QS6 385 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 FERMT1Q9BQL6 677 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 NT5MQ9NPB1 228 aa13.06□□□□□ -0.32
TRAPPC4-212ENST00000533058 TPRP12270 2363 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 SPAARA0A1B0GVQ0 90 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 FAM221BA6H8Z2 402 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 HACD1B0YJ81 288 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 KCNK1O00180 336 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 SLC31A1O15431 190 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 DKK1O94907 266 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 CCNB1P14635 433 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 ABL2P42684 1182 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 PPIDQ08752 370 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 SLC10A7Q0GE19 358 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 NOMO1Q15155 1222 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 SHBQ15464 509 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 SEL1L3Q68CR1 1132 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 BRAT1Q6PJG6 821 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 TTC7BQ86TV6 843 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 CDKL3Q8IVW4 592 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms