RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 FADS3Q9Y5Q0 445 aa11.32□□□□□ -0.6
TRAPPC4-211ENST00000533012 UQCRHLA0A096LP55 91 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 PRR23AA6NEV1 266 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 METTL12A8MUP2 240 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 ANKRD66B4E2M5 251 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 F5H423 210 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 CCDC188H7C350 402 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 PDE2AO00408 941 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 RIOK3O14730 519 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 AREL1O15033 823 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 PSMD3O43242 534 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 METTL18O95568 372 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 EPOP01588 193 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 UQCRHP07919 91 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 PDHA1P08559 390 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 ETS1P14921 441 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 PSMB4P28070 264 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 ABL2P42684 1182 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 FNTAP49354 379 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 WNT3AP56704 352 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 TAS2R38P59533 333 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 PLK5Q496M5 336 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 SYCP2LQ5T4T6 812 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 KIAA0895LQ68EN5 471 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 TTC27Q6P3X3 843 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 ZSWIM9Q86XI8 627 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 TMEFF1Q8IYR6 380 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 PIH1D2Q8WWB5 315 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 RMDN1Q96DB5 314 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 SCRN2Q96FV2 425 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 OXNAD1Q96HP4 312 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 RUNDC3BQ96NL0 473 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 MLPHQ9BV36 600 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 PCDH12Q9NPG4 1184 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 CDC23Q9UJX2 597 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 TPX2Q9ULW0 747 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 KMT2EQ8IZD2 1858 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 CACNA1IQ9P0X4 2223 aa11.31□□□□□ -0.6
TRAPPC4-211ENST00000533012 CKAP5Q14008 2032 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 LOC285095A0A1B0GVY8 99 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 E7EVH7 732 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 RNGTTO60942 597 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 FSBPO95073 299 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 NDST3O95803 873 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 GAS8O95995 478 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 PRLP01236 227 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 ZSCAN5DPP0CG00 497 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 CYP2A6P11509 494 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 ITIH2P19823 946 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 RPL22P35268 128 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 FDFT1P37268 417 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 GRIA4P48058 902 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 LMAN1P49257 510 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 DHPSP49366 369 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 RPS21P63220 83 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 CKAP4Q07065 602 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 TMEM52BQ4KMG9 183 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 LRRC73Q5JTD7 316 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 WDR45BQ5MNZ6 344 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 PMS2CLQ68D20 193 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 KIAA1161Q6NSJ0 714 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 KDELC1Q6UW63 502 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 USP45Q70EL2 814 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 PRUNE1Q86TP1 453 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 KLHL7Q8IXQ5 586 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 TAB3Q8N5C8 712 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 LPCAT1Q8NF37 534 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 IPMKQ8NFU5 416 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 CXorf40AQ8TE69 158 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 MRGPRX2Q96LB1 330 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 TRIB3Q96RU7 358 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 FSD1LQ9BXM9 530 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 DDX47Q9H0S4 455 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 EPC1Q9H2F5 836 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 C6orf106Q9H6K1 298 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 ETNK1Q9HBU6 452 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 RAB6BQ9NRW1 208 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 PPIL1Q9Y3C6 166 aa11.3□□□□□ -0.6
TRAPPC4-211ENST00000533012 WDFY4Q6ZS81 3184 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 A0A0J9YYE9 177 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 A0A1W2PQU0 124 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 MEI4A8MW99 385 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 A8MX80 341 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 ECEL1O95672 775 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 TRBC1P01850 177 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 KRT14P02533 472 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 PRKCGP05129 697 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 CTPS1P17812 591 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 HNF1BP35680 557 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 NUDT1P36639 197 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 NBL1P41271 181 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 CCR5P51681 352 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 SGCGQ13326 291 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 ARHGEF7Q14155 803 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 GALNT3Q14435 633 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 PPP1R7Q15435 360 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 QPCTQ16769 361 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 WHAMMP3Q1A5X7 153 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 LYSMD4Q5XG99 296 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms