RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 MAXP61244 160 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 TRIM14Q14142 442 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 PIGHQ14442 188 aaPredicted RBP17.93■□□□□ 0.46
SMG1-203ENST00000532700 ACAP1Q15027 740 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 SPECC1LQ69YQ0 1117 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 SARM1Q6SZW1 724 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 TMCO3Q6UWJ1 677 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 ZNF564Q8TBZ8 553 aaPredicted RBP17.93■□□□□ 0.46
SMG1-203ENST00000532700 FAM71BQ8TC56 605 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 LMX1AQ8TE12 382 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 TEKT4Q8WW24 435 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 CRELD1Q96HD1 420 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 ZNF641Q96N77 438 aaPredicted RBP17.93■□□□□ 0.46
SMG1-203ENST00000532700 PSKH2Q96QS6 385 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 TUBGCP5Q96RT8 1024 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 IP6K2Q9UHH9 426 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 GPSM3Q9Y4H4 160 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 OR1A2Q9Y585 309 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 PCDHB1Q9Y5F3 818 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 DSPP15924 2871 aaKnown RBP17.93■□□□□ 0.46
SMG1-203ENST00000532700 APC2O95996 2303 aa17.93■□□□□ 0.46
SMG1-203ENST00000532700 AQP9O43315 295 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 TPM1P09493 284 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 C1SP09871 688 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 CKMT1AP12532 417 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 JUPP14923 745 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 ARL4AP40617 200 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 CDH6P55285 790 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 HNRNPKP61978 463 aaKnown RBP eCLIP17.92■□□□□ 0.46
SMG1-203ENST00000532700 DAB2P98082 770 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 TRAF2Q12933 501 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 DPYSL3Q14195 570 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 INPP5AQ14642 412 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 BOLA3Q53S33 107 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 TMCO4Q5TGY1 634 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 BRAT1Q6PJG6 821 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 ZSCAN30Q86W11 494 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 DCP2Q8IU60 420 aaKnown RBP17.92■□□□□ 0.46
SMG1-203ENST00000532700 PHACTR4Q8IZ21 702 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 FAM174AQ8TBP5 190 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 HCAR2Q8TDS4 363 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 RFFLQ8WZ73 363 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 TSACCQ96A04 125 aaPredicted RBP17.92■□□□□ 0.46
SMG1-203ENST00000532700 DNAJC7Q99615 494 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 CHP1Q99653 195 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 TRIM5Q9C035 493 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 RBSNQ9H1K0 784 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 ATP13A3Q9H7F0 1226 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 PCDHGC4Q9Y5F7 938 aa17.92■□□□□ 0.46
SMG1-203ENST00000532700 ASXL3Q9C0F0 2248 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 PCCBP05166 539 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 HOXB3P14651 431 aaPredicted RBP17.91■□□□□ 0.46
SMG1-203ENST00000532700 XPAP23025 273 aaPredicted RBP17.91■□□□□ 0.46
SMG1-203ENST00000532700 SERPINA4P29622 427 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 ELP6Q0PNE2 266 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 LRRC14Q15048 493 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 CDKN3Q16667 212 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 ALG11Q2TAA5 492 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 PERM1Q5SV97 790 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 NCBP2-AS2Q69YL0 99 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 GUSBP11Q6P575 273 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 CRTC1Q6UUV9 634 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 LIPIQ6XZB0 460 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 MACC1Q6ZN28 852 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 SFTPA2Q8IWL1 248 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 PCDH19Q8TAB3 1148 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 NOD2Q9HC29 1040 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 DKK4Q9UBT3 224 aa17.91■□□□□ 0.46
SMG1-203ENST00000532700 APOBEC3BQ9UH17 382 aaKnown RBP17.91■□□□□ 0.46
SMG1-203ENST00000532700 ANKRD11Q6UB99 2663 aaPredicted RBP17.9■□□□□ 0.46
SMG1-203ENST00000532700 NBEAQ8NFP9 2946 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 TLX3O43711 291 aaPredicted RBP17.9■□□□□ 0.46
SMG1-203ENST00000532700 RECQL5O94762 991 aaPredicted RBP17.9■□□□□ 0.46
SMG1-203ENST00000532700 SSR1P43307 286 aaKnown RBP17.9■□□□□ 0.46
SMG1-203ENST00000532700 ZNF135P52742 658 aaPredicted RBP17.9■□□□□ 0.46
SMG1-203ENST00000532700 THOP1P52888 689 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 ADKP55263 362 aaKnown RBP17.9■□□□□ 0.46
SMG1-203ENST00000532700 BCL2L1Q07817 233 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 NSUN2Q08J23 767 aaKnown RBP eCLIP17.9■□□□□ 0.46
SMG1-203ENST00000532700 RFTN1Q14699 578 aaPredicted RBP17.9■□□□□ 0.46
SMG1-203ENST00000532700 PRRT3Q5FWE3 981 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 DPPA4Q7L190 304 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 VSTM4Q8IW00 320 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 SLC35F3Q8IY50 421 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 LZTR1Q8N653 840 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 PQLC3Q8N755 202 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 PDCD7Q8N8D1 485 aaKnown RBP17.9■□□□□ 0.46
SMG1-203ENST00000532700 DCBLD1Q8N8Z6 715 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 PDXPQ96GD0 296 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 ZNF599Q96NL3 588 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 MGME1Q9BQP7 344 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 APOOQ9BUR5 198 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 SPTLC3Q9NUV7 552 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 CTTNBP2NLQ9P2B4 639 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 B4GALT6Q9UBX8 382 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 SEPT3Q9UH03 358 aa17.9■□□□□ 0.46
SMG1-203ENST00000532700 RP1P56715 2156 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 PMS2P1A4D2B8 440 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 TMEM110-MUSTN1A8MSY1 372 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 HTRA2O43464 458 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms