RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 COQ6Q9Y2Z9 468 aa17.36■□□□□ 0.37
PHRF1-204ENST00000532550 SHROOM3Q8TF72 1996 aa17.36■□□□□ 0.37
PHRF1-204ENST00000532550 ASPMQ8IZT6 3477 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 TTC24A2A3L6 582 aaPredicted RBP17.35■□□□□ 0.37
PHRF1-204ENST00000532550 CFAP69A5D8W1 941 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 TMEM110-MUSTN1A8MSY1 372 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 AKR1B15C9JRZ8 316 aaPredicted RBP17.35■□□□□ 0.37
PHRF1-204ENST00000532550 SCAMP1O15126 338 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 PRKCGP05129 697 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 C6P13671 934 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 JUPP14923 745 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 NME1P15531 152 aaKnown RBP17.35■□□□□ 0.37
PHRF1-204ENST00000532550 JUNDP17535 347 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 IGFALSP35858 605 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 ARSEP51690 589 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 SEMG2Q02383 582 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 DPYSL3Q14195 570 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 MESDQ14696 234 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 PROX2Q3B8N5 592 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 TP53I13Q8NBR0 393 aaPredicted RBP17.35■□□□□ 0.37
PHRF1-204ENST00000532550 SLC35G2Q8TBE7 412 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 ECHDC3Q96DC8 303 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 DUSP23Q9BVJ7 150 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 TRIM5Q9C035 493 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 NLGN3Q9NZ94 848 aa17.35■□□□□ 0.37
PHRF1-204ENST00000532550 A0A1W2PQ67 120 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 FAM149AA5PLN7 773 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 TRAFD1O14545 582 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-204ENST00000532550 KRT37O76014 449 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 PEX11BO96011 259 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 ACP1P24666 158 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 MAN1A1P33908 653 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 HNF1BP35680 557 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 MMP12P39900 470 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 MMP13P45452 471 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 PEX5P50542 639 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 TAS2R40P59535 323 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 EIF2B5Q13144 721 aaKnown RBP17.34■□□□□ 0.37
PHRF1-204ENST00000532550 LRRK1Q38SD2 2015 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 ANKRD20A8PQ5CZ79 823 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 TPRG1LQ5T0D9 272 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 KDM7AQ6ZMT4 941 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 MARCH9Q86YJ5 346 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 CPNE8Q86YQ8 564 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 LMX1AQ8TE12 382 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 PDCD6IPQ8WUM4 868 aaKnown RBP17.34■□□□□ 0.37
PHRF1-204ENST00000532550 NUDCD1Q96RS6 583 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 ZNF670Q9BS34 389 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 CAAP1Q9H8G2 361 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 SPTLC3Q9NUV7 552 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 KLF15Q9UIH9 416 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 KMT2BQ9UMN6 2715 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-204ENST00000532550 PCDHGC4Q9Y5F7 938 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 CSNK1G3Q9Y6M4 447 aa17.34■□□□□ 0.37
PHRF1-204ENST00000532550 AQP9O43315 295 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 NEBLO76041 1014 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 GIMD1P0DJR0 217 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 NFKBIAP25963 317 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 ARHGAP25P42331 645 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 DUSP3P51452 185 aaPredicted RBP17.33■□□□□ 0.36
PHRF1-204ENST00000532550 E2F1Q01094 437 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 ITKQ08881 620 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 INPP5AQ14642 412 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 PAFAH1B3Q15102 231 aaKnown RBP17.33■□□□□ 0.36
PHRF1-204ENST00000532550 AGERQ15109 404 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 IRF4Q15306 451 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 WSCD2Q2TBF2 565 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 RALGPS1Q5JS13 557 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 FAXCQ5TGI0 409 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 RHOT2Q8IXI1 618 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 PGBD5Q8N414 524 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 ZNF548Q8NEK5 533 aaPredicted RBP17.33■□□□□ 0.36
PHRF1-204ENST00000532550 PCDH19Q8TAB3 1148 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 MGME1Q9BQP7 344 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 SLC13A1Q9BZW2 595 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 CCDC86Q9H6F5 360 aaKnown RBP17.33■□□□□ 0.36
PHRF1-204ENST00000532550 NOD2Q9HC29 1040 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 EVA1BQ9NVM1 165 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 SPASTQ9UBP0 616 aa17.33■□□□□ 0.36
PHRF1-204ENST00000532550 TRABD2BA6NFA1 517 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 A8MX80 341 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 K7ESM1 405 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 SOCS5O75159 536 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 ELFN1P0C7U0 828 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 CR2P20023 1033 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 KDELR1P24390 212 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 HTR1BP28222 390 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 GARSP41250 739 aaKnown RBP17.32■□□□□ 0.36
PHRF1-204ENST00000532550 BLKP51451 505 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 MAXP61244 160 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 PPARDQ03181 441 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 TBX2Q13207 712 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-204ENST00000532550 IFI16Q16666 785 aaKnown RBP17.32■□□□□ 0.36
PHRF1-204ENST00000532550 NCBP2-AS2Q69YL0 99 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 TIGD7Q6NT04 549 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-204ENST00000532550 SARM1Q6SZW1 724 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 LIPIQ6XZB0 460 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 MACC1Q6ZN28 852 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 DPPA4Q7L190 304 aa17.32■□□□□ 0.36
PHRF1-204ENST00000532550 PDCD7Q8N8D1 485 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms