RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 TMEM8BA6NDV4 472 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 H3BM21 787 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 TRAFD1O14545 582 aaPredicted RBP23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 LZTS3O60299 673 aaPredicted RBP23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 MAP3K6O95382 1288 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 CSF2P04141 144 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 KRT7P08729 469 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 NME1P15531 152 aaKnown RBP23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 CKMT2P17540 419 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 MAN1A1P33908 653 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 HSPA9P38646 679 aaKnown RBP23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 MMP13P45452 471 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 EIF2B5Q13144 721 aaKnown RBP23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 TBX2Q13207 712 aaPredicted RBP23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 ZNF211Q13398 564 aaPredicted RBP23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 LRRC14Q15048 493 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 PDK2Q15119 407 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 MARC1Q5VT66 337 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 KDF1Q8NAX2 398 aaPredicted RBP23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 OR4C6Q8NH72 309 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 PDCD6IPQ8WUM4 868 aaKnown RBP23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 ZNF670Q9BS34 389 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 PCDHGC4Q9Y5F7 938 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 PCDHGA1Q9Y5H4 931 aa23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 GOLGA4Q13439 2230 aaKnown RBP23.05■■□□□ 1.28
PPP1CA-207ENST00000532279 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 A8MX80 341 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 NEBLO76041 1014 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 JUNDP17535 347 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 CLDN6P56747 220 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 POLR2LP62875 67 aaKnown RBP23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 DAB2P98082 770 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 RALGDSQ12967 914 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 PTK2BQ14289 1009 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 WSCD2Q2TBF2 565 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 PROX2Q3B8N5 592 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 SARM1Q6SZW1 724 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 MAP7D3Q8IWC1 876 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 ZNF548Q8NEK5 533 aaPredicted RBP23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 NUDCD1Q96RS6 583 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 MGME1Q9BQP7 344 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 NOD2Q9HC29 1040 aa23.04■■□□□ 1.28
PPP1CA-207ENST00000532279 NEMP2A6NFY4 417 aa23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 KRT37O76014 449 aa23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 C1SP09871 688 aa23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 GIMD1P0DJR0 217 aa23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 CR2P20023 1033 aa23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 GARSP41250 739 aaKnown RBP23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 YPEL5P62699 121 aa23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 GALNT2Q10471 571 aa23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 PAFAH1B3Q15102 231 aaKnown RBP23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 SMAD1Q15797 465 aaKnown RBP23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 RBFAQ8N0V3 343 aa23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 LRRN4Q8WUT4 740 aa23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 NT5MQ9NPB1 228 aa23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 NLGN3Q9NZ94 848 aa23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 MYLKQ15746 1914 aa23.03■■□□□ 1.28
PPP1CA-207ENST00000532279 CACNA1BQ00975 2339 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 SCAMP1O15126 338 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 PCCBP05166 539 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 ELFN1P0C7U0 828 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 ALPPL2P10696 532 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 ITKQ08881 620 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 LIPIQ6XZB0 460 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 LRRC49Q8IUZ0 686 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 RHOT2Q8IXI1 618 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 LMX1AQ8TE12 382 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 RFFLQ8WZ73 363 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 RAPGEF5Q92565 580 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 TCEAL2Q9H3H9 227 aaPredicted RBP23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 EPG5Q9HCE0 2579 aa23.02■■□□□ 1.28
PPP1CA-207ENST00000532279 LRRD1A4D1F6 860 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 K7ESM1 405 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 CPP00450 1065 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 MYF5P13349 255 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 KDELR1P24390 212 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 ARHGAP25P42331 645 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 TRAF2Q12933 501 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 INPP5AQ14642 412 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 MACC1Q6ZN28 852 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 DPPA4Q7L190 304 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 PHACTR4Q8IZ21 702 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 PQLC3Q8N755 202 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 FAF2Q96CS3 445 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 APOLD1Q96LR9 279 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 APOBEC3BQ9UH17 382 aaKnown RBP23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 PNMA8BQ9ULN7 279 aaPredicted RBP23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 LRP4O75096 1905 aa23.01■■□□□ 1.27
PPP1CA-207ENST00000532279 TOR1BO14657 336 aa23■■□□□ 1.27
PPP1CA-207ENST00000532279 AQP9O43315 295 aa23■■□□□ 1.27
PPP1CA-207ENST00000532279 HTRA2O43464 458 aaPredicted RBP23■■□□□ 1.27
PPP1CA-207ENST00000532279 SOCS5O75159 536 aa23■■□□□ 1.27
PPP1CA-207ENST00000532279 RECQL5O94762 991 aaPredicted RBP23■■□□□ 1.27
PPP1CA-207ENST00000532279 CDK4P11802 303 aa23■■□□□ 1.27
PPP1CA-207ENST00000532279 ACP1P24666 158 aa23■■□□□ 1.27
PPP1CA-207ENST00000532279 GBE1Q04446 702 aa23■■□□□ 1.27
PPP1CA-207ENST00000532279 PRRT3Q5FWE3 981 aa23■■□□□ 1.27
PPP1CA-207ENST00000532279 FAXCQ5TGI0 409 aa23■■□□□ 1.27
PPP1CA-207ENST00000532279 TIGD7Q6NT04 549 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms