RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 FIBINQ8TAL6 211 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 CYB5D2Q8WUJ1 264 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 RXFP2Q8WXD0 754 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 ASB11Q8WXH4 323 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 SIPA1Q96FS4 1042 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 BTN2A3PQ96KV6 586 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 PRMT1Q99873 361 aaKnown RBP7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 SLC2A11Q9BYW1 496 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 CIPCQ9C0C6 399 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 XPO4Q9C0E2 1151 aaKnown RBP7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 TKTL2Q9H0I9 626 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 SIK2Q9H0K1 926 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 MTG2Q9H4K7 406 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 WDCPQ9H6R7 721 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 FAM204AQ9H8W3 233 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 TM9SF3Q9HD45 589 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 METTL5Q9NRN9 209 aaKnown RBP7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 SEPT11Q9NVA2 429 aaKnown RBP7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 AIPL1Q9NZN9 384 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 ADAM22Q9P0K1 906 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 THAP10Q9P2Z0 257 aaPredicted RBP7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 GGT7Q9UJ14 662 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 ANKRD6Q9Y2G4 727 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 DAAM1Q9Y4D1 1078 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 PCDHGB2Q9Y5G2 931 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 HS3ST4Q9Y661 456 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 CAPN6Q9Y6Q1 641 aa7.18□□□□□ -1.26
TRIM53CP-201ENST00000531490 NOTCH2Q04721 2471 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 C2CD4BA6NLJ0 364 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 GOLGA6L19H0YKK7 550 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 DDX3XO00571 662 aaKnown RBP eCLIP7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 PAX4O43316 350 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 CNTN5O94779 1100 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 ENDOD1O94919 500 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 CBX7O95931 251 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 APOEP02649 317 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 RNASE1P07998 156 aaKnown RBP7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 PLEKP08567 350 aaPredicted RBP7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 PDGFRAP16234 1089 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 FERP16591 822 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 ABCB4P21439 1286 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 RRM1P23921 792 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 ACSL1P33121 698 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 EIF4A3P38919 411 aaKnown RBP7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 GRK6P43250 576 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 SULT1E1P49888 294 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 AFF3P51826 1226 aaKnown RBP7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 COPAP53621 1224 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 RPL7AP62424 266 aaKnown RBP7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 CXADRP78310 365 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 DEUP1Q05D60 604 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 ZNF234Q14588 700 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 STARD3Q14849 445 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 PREPLQ4J6C6 727 aaPredicted RBP7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 MPP7Q5T2T1 576 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 SFMBT2Q5VUG0 894 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 ACAD10Q6JQN1 1059 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 WDR59Q6PJI9 974 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 CHST9Q7L1S5 443 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 MON1BQ7L1V2 547 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 REC114Q7Z4M0 266 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 TMPRSS12Q86WS5 348 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 MCOLN2Q8IZK6 566 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 APCDD1Q8J025 514 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 CARNMT1Q8N4J0 409 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 ATP6V0D2Q8N8Y2 350 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 PRCCQ92733 491 aaPredicted RBP7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 PGAP3Q96FM1 320 aaPredicted RBP7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 NAF1Q96HR8 494 aaKnown RBP7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 TRIM62Q9BVG3 475 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 NUP58Q9BVL2 599 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 TSPY26PQ9H489 355 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 GRPEL1Q9HAV7 217 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 SEMA3GQ9NS98 782 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 ARHGEF38Q9NXL2 777 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 REV1Q9UBZ9 1251 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 FTSJ1Q9UET6 329 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 SLCO3A1Q9UIG8 710 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 GGA2Q9UJY4 613 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 VANGL2Q9ULK5 521 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 ST14Q9Y5Y6 855 aa7.17□□□□□ -1.26
TRIM53CP-201ENST00000531490 USP9XQ93008 2570 aaPredicted RBP7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 SIGLEC16A6NMB1 481 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 SYNCRIPO60506 623 aaKnown RBP7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 SRGAP2O75044 1071 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 FSBPO95073 299 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 F9P00740 461 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 FTLP02792 175 aaPredicted RBP7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 GYPCP04921 128 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 SLC2A3P11169 496 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 PABPC1P11940 636 aaKnown RBP7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 KRT3P12035 628 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 OXTRP30559 389 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 NSFP46459 744 aaKnown RBP7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 OGDHQ02218 1023 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 TLE3Q04726 772 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 KLHL30Q0D2K2 578 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 IKZF1Q13422 519 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 ENPP2Q13822 863 aa7.16□□□□□ -1.26
TRIM53CP-201ENST00000531490 ASIC2Q16515 512 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms