RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 KDELC2Q7Z4H8 507 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 MARCH9Q86YJ5 346 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 CCDC13Q8IYE1 715 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 TP53I13Q8NBR0 393 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 PTCD2Q8WV60 388 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 HDAC11Q96DB2 347 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 PPP1R16AQ96I34 528 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 ZNF599Q96NL3 588 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 AGAP3Q96P47 875 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 RBM15Q96T37 977 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 C1QTNF2Q9BXJ5 285 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 CPEB1Q9BZB8 566 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 LZTFL1Q9NQ48 299 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 UCKL1Q9NWZ5 548 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 DDX56Q9NY93 547 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 UBP1Q9NZI7 540 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 KLF15Q9UIH9 416 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 CHKBQ9Y259 395 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 PCDHB9Q9Y5E1 797 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 PCDHA3Q9Y5H8 950 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 ASCC3Q8N3C0 2202 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 CXorf51AA0A1B0GTR3 108 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 NEMP1O14524 444 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 VILLO15195 856 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 HTRA2O43464 458 aaPredicted RBP11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 AP1G1O43747 822 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 MT-CYBP00156 380 aaPredicted RBP11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 CPP00450 1065 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 PRLP01236 227 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 CELA2BP08218 269 aaPredicted RBP11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 CCNB1P14635 433 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 GNSP15586 552 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 PTPN3P26045 913 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 CD38P28907 300 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 HOXD12P35452 270 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 CD86P42081 329 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 CSNK1DP48730 415 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 LIG3P49916 1009 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 LIMK1P53667 647 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 RACK1P63244 317 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 GALNT3Q14435 633 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 CNGA3Q16281 694 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 UGP2Q16851 508 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 WSCD2Q2TBF2 565 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 TFDP3Q5H9I0 405 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 PPM1JQ5JR12 505 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 DENND2CQ68D51 928 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 HSD11B1LQ7Z5J1 315 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 PTAR1Q7Z6K3 402 aaPredicted RBP11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 ADAT2Q7Z6V5 191 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 PRUNE1Q86TP1 453 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 PRPF39Q86UA1 669 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 MAP7D3Q8IWC1 876 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 GPR161Q8N6U8 529 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 CEP76Q8TAP6 659 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 PIH1D2Q8WWB5 315 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 ATG4AQ8WYN0 398 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 TSGA13Q96PP4 275 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 IL12RB2Q99665 862 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 OSBPL1AQ9BXW6 950 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 SLC17A9Q9BYT1 436 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 ATP13A3Q9H7F0 1226 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 DNAAF2Q9NVR5 837 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 DKK3Q9UBP4 350 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 SUSD2Q9UGT4 822 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 CD84Q9UIB8 345 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 ATP8A1Q9Y2Q0 1164 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 RAI2Q9Y5P3 530 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 LRP4O75096 1905 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 MYLKQ15746 1914 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 CACNA1EQ15878 2313 aa11.48□□□□□ -0.57
CCDC90B-211ENST00000529073 TRPM6Q9BX84 2022 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 USP27XA6NNY8 438 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 PRR5-ARHGAP8B1AHC4 643 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 ZNF487B1APH4 448 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 TLR4O00206 839 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 FZD6O60353 706 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 ZRANB2O95218 330 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 KCNK5O95279 499 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 PGLSO95336 258 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 PCCBP05166 539 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 C1SP09871 688 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 THEGLP0DJG4 465 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 NFKB1P19838 968 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 HNRNPA2B1P22626 353 aaKnown RBP11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 CCNCP24863 283 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 RBL1P28749 1068 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 SERPINA4P29622 427 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 CHRNA4P43681 627 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 NOVA1P51513 510 aaKnown RBP11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 GSDMDP57764 484 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 AP1S1P61966 158 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 IFI35P80217 286 aaPredicted RBP11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 ARHGAP8P85298 464 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 OTUD4Q01804 1114 aaKnown RBP11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 KIF5AQ12840 1032 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 RFTN1Q14699 578 aaPredicted RBP11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 PCSK7Q16549 785 aa11.47□□□□□ -0.57
CCDC90B-211ENST00000529073 ZNF423Q2M1K9 1284 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms