RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 FARSAQ9Y285 508 aaKnown RBP7□□□□□ -1.29
VPS26B-204ENST00000527586 HBS1LQ9Y450 684 aaKnown RBP7□□□□□ -1.29
VPS26B-204ENST00000527586 GOLGA8IPA6NC78 632 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 GOLGA8JA6NMD2 632 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 DRGXA6NNA5 263 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 PPM1DO15297 605 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 AP1G1O43747 822 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 CST3P01034 146 aaPredicted RBP6.99□□□□□ -1.29
VPS26B-204ENST00000527586 PRNPP04156 253 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 GSPT1P15170 499 aaKnown RBP6.99□□□□□ -1.29
VPS26B-204ENST00000527586 XBP1P17861 261 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 SLC11A2P49281 568 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 VAV2P52735 878 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 CASP6P55212 293 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 YWHAGP61981 247 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS26B-204ENST00000527586 NFATC4Q14934 902 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 POSTNQ15063 836 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 HIF1AQ16665 826 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.99□□□□□ -1.29
VPS26B-204ENST00000527586 ARSIQ5FYB1 569 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 FAM26FQ5R3K3 315 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 FOXR2Q6PJQ5 311 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 FAM186BQ8IYM0 893 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 ARHGAP18Q8N392 663 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 MYCT1Q8N699 235 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 CHST14Q8NCH0 376 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 GRIN3AQ8TCU5 1115 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 PPP1R16AQ96I34 528 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 SECISBP2Q96T21 854 aaKnown RBP6.99□□□□□ -1.29
VPS26B-204ENST00000527586 DDX50Q9BQ39 737 aaKnown RBP6.99□□□□□ -1.29
VPS26B-204ENST00000527586 TRIM56Q9BRZ2 755 aaKnown RBP6.99□□□□□ -1.29
VPS26B-204ENST00000527586 C19orf24Q9BVV8 132 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 TMEM168Q9H0V1 697 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 ZNF552Q9H707 407 aaPredicted RBP6.99□□□□□ -1.29
VPS26B-204ENST00000527586 SPATS2LQ9NUQ6 558 aaKnown RBP6.99□□□□□ -1.29
VPS26B-204ENST00000527586 FAM49BQ9NUQ9 324 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 SIDT1Q9NXL6 827 aaKnown RBP6.99□□□□□ -1.29
VPS26B-204ENST00000527586 KLHL3Q9UH77 587 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 USP3Q9Y6I4 520 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 WASF2Q9Y6W5 498 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 SVEP1Q4LDE5 3571 aa6.99□□□□□ -1.29
VPS26B-204ENST00000527586 NYNRINQ9P2P1 1898 aaKnown RBP6.98□□□□□ -1.29
VPS26B-204ENST00000527586 NEMP1O14524 444 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 CPLX1O14810 134 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 TSPAN6O43657 245 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 ACSL4O60488 711 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 SPAG6O75602 509 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 IPO13O94829 963 aaKnown RBP6.98□□□□□ -1.29
VPS26B-204ENST00000527586 SLCO2B1O94956 709 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 UNC5CO95185 931 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 FGF1P05230 155 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 IDEP14735 1019 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 PDGFRAP16234 1089 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 KRT2P35908 639 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 GPLD1P80108 840 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 GTF2BQ00403 316 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 MYBPC3Q14896 1274 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 DUOXA2Q1HG44 320 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 RNF20Q5VTR2 975 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 ZNF324BQ6AW86 544 aaPredicted RBP6.98□□□□□ -1.29
VPS26B-204ENST00000527586 NADSYN1Q6IA69 706 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 SKAP1Q86WV1 359 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 DMRTC2Q8IXT2 367 aaPredicted RBP6.98□□□□□ -1.29
VPS26B-204ENST00000527586 C12orf29Q8N999 325 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 DNAAF3Q8N9W5 541 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 OR2A12Q8NGT7 310 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 ATL2Q8NHH9 583 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 DNAJB14Q8TBM8 379 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 NOC3LQ8WTT2 800 aaKnown RBP6.98□□□□□ -1.29
VPS26B-204ENST00000527586 CA5BP1Q8WTZ4 195 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 SMYD3Q9H7B4 428 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 GPAMQ9HCL2 828 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 PNPLA8Q9NP80 782 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 STMN3Q9NZ72 180 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 APEX2Q9UBZ4 518 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 ZNHIT2Q9UHR6 403 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 ITM2BQ9Y287 266 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 DGKBQ9Y6T7 804 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 BIRC6Q9NR09 4857 aa6.98□□□□□ -1.29
VPS26B-204ENST00000527586 GOLGA6L3A6NEY3 463 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 RASA4BC9J798 803 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 RASA4O43374 803 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 SLC26A4O43511 780 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 KLHL41O60662 606 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 EIF5BO60841 1220 aaKnown RBP6.97□□□□□ -1.29
VPS26B-204ENST00000527586 LEFTY1O75610 366 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 CTAG2O75638 210 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 HMGB1P09429 215 aaKnown RBP6.97□□□□□ -1.29
VPS26B-204ENST00000527586 NKX6-1P78426 367 aaPredicted RBP6.97□□□□□ -1.29
VPS26B-204ENST00000527586 DMPKQ09013 629 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 CHD3Q12873 2000 aaKnown RBP6.97□□□□□ -1.29
VPS26B-204ENST00000527586 HDAC1Q13547 482 aaPredicted RBP6.97□□□□□ -1.29
VPS26B-204ENST00000527586 ATP1A4Q13733 1029 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 TRIM29Q14134 588 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 ZNF169Q14929 603 aaPredicted RBP6.97□□□□□ -1.29
VPS26B-204ENST00000527586 IRF4Q15306 451 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 C3AR1Q16581 482 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 SHEQ5VZ18 495 aa6.97□□□□□ -1.29
VPS26B-204ENST00000527586 B3GNTL1Q67FW5 361 aaPredicted RBP6.97□□□□□ -1.29
VPS26B-204ENST00000527586 WDR74Q6RFH5 385 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms