RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 CROTQ9UKG9 612 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 RECQL4O94761 1208 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 SNRPB2P08579 225 aaKnown RBP12.59□□□□□ -0.39
CAPN1-208ENST00000527323 HSPA8P11142 646 aaKnown RBP12.59□□□□□ -0.39
CAPN1-208ENST00000527323 SLC7A1P30825 629 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 CD52P31358 61 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 STT3AP46977 705 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 EMP3P54852 163 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 TAS2R39P59534 338 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 ACBD5Q5T8D3 534 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-208ENST00000527323 ESRP1Q6NXG1 681 aaKnown RBP12.59□□□□□ -0.39
CAPN1-208ENST00000527323 KLHL35Q6PF15 583 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 PIWIL4Q7Z3Z4 852 aaKnown RBP12.59□□□□□ -0.39
CAPN1-208ENST00000527323 GPR141Q7Z602 305 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 DHFR2Q86XF0 187 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 ALDH16A1Q8IZ83 802 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 KLHL23Q8NBE8 558 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 B3GALNT2Q8NCR0 500 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 ARRDC4Q8NCT1 418 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 SPPL2BQ8TCT7 592 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 IRGQQ8WZA9 623 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 RNF34Q969K3 372 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 ADAMTS10Q9H324 1103 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 SPC25Q9HBM1 224 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 UBQLN1Q9UMX0 589 aaKnown RBP12.59□□□□□ -0.39
CAPN1-208ENST00000527323 DERAQ9Y315 318 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 A0A0C4DFX4 3053 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 NRCAMQ92823 1304 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 ATP6AP2A0A1C7CYW4 349 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 TARM1B6A8C7 271 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 F8W810 466 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 HTRA2O43464 458 aaPredicted RBP12.58□□□□□ -0.39
CAPN1-208ENST00000527323 NPHS1O60500 1241 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 ATP6AP2O75787 350 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 SRP72O76094 671 aaKnown RBP12.58□□□□□ -0.39
CAPN1-208ENST00000527323 ALDH1A1P00352 501 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 CAPNS1P04632 268 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 C8BP07358 591 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 ATP5F1P24539 256 aaPredicted RBP12.58□□□□□ -0.39
CAPN1-208ENST00000527323 GRIA3P42263 894 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 SEPT6Q14141 434 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 C16orf72Q14CZ0 275 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 ARL13BQ3SXY8 428 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 TSTD2Q5T7W7 516 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 PKN3Q6P5Z2 889 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 SLC27A1Q6PCB7 646 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 TTC33Q6PID6 262 aaPredicted RBP12.58□□□□□ -0.39
CAPN1-208ENST00000527323 CARM1Q86X55 608 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 TEKT5Q96M29 485 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 MRPL57Q9BQC6 102 aaKnown RBP12.58□□□□□ -0.39
CAPN1-208ENST00000527323 SLC39A3Q9BRY0 314 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 BEGAINQ9BUH8 593 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 ULBP1Q9BZM6 244 aa12.58□□□□□ -0.39
CAPN1-208ENST00000527323 TIMM13Q9Y5L4 95 aaPredicted RBP12.58□□□□□ -0.39
CAPN1-208ENST00000527323 FBP2O00757 339 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 NRP1O14786 923 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 TPST1O60507 370 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 MT-CYBP00156 380 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 CHRNA1P02708 482 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 NPR3P17342 541 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 SLC7A2P52569 658 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 SQLEQ14534 574 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 PCID2Q5JVF3 399 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 SAMD4BQ5PRF9 694 aaKnown RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 RWDD4Q6NW29 188 aaKnown RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 TMCO2Q7Z6W1 182 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 LINC00523Q86TU6 105 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 EMID1Q96A84 441 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 SLCO4A1Q96BD0 722 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 KIFC1Q9BW19 673 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 RNF208Q9H0X6 261 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 CNOT6Q9ULM6 557 aaKnown RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 SLC8A2Q9UPR5 921 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 ZNF711Q9Y462 761 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 RNF103-CHMP3A0A140T963 221 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 H0YJX3 145 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 DFFAO00273 331 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 PQBP1O60828 265 aaKnown RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 ADAMTS4O75173 837 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 TSPAN8P19075 237 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 LRPAP1P30533 357 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 GRK4P32298 578 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 ALDH3B2P48448 385 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 RPL34P49207 117 aaKnown RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 TAF6P49848 677 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 KPNA2P52292 529 aaKnown RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 NME5P56597 212 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 SULT2A1Q06520 285 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 LRP8Q14114 963 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 ZBTB6Q15916 424 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 IL31Q6EBC2 164 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 CHSY3Q70JA7 882 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 OR9I1Q8NGQ6 314 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 CANT1Q8WVQ1 401 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 ZNF560Q96MR9 790 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 ATXN3LQ9H3M9 355 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 EML4Q9HC35 981 aaKnown RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 GMPR2Q9P2T1 348 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms