RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 ZFR2Q9UPR6 939 aaKnown RBP16.75■□□□□ 0.27
SMCO4-204ENST00000527149 ZNF148Q9UQR1 794 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 CHKBQ9Y259 395 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 PPIL1Q9Y3C6 166 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 SLCO1B1Q9Y6L6 691 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 A0A1W2PQ67 120 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 METTL12A8MUP2 240 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 MAP3K13O43283 966 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 METTL18O95568 372 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 ETS1P14921 441 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 CASQ1P31415 396 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 STIP1P31948 543 aaKnown RBP16.74■□□□□ 0.27
SMCO4-204ENST00000527149 CCR5P51681 352 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 WNT3AP56704 352 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 RPL26P61254 145 aaKnown RBP16.74■□□□□ 0.27
SMCO4-204ENST00000527149 PTPRRQ15256 657 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 ZNF284Q2VY69 593 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 P3H1Q32P28 736 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 CFAP58Q5T655 872 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 PEAR1Q5VY43 1037 aaPredicted RBP16.74■□□□□ 0.27
SMCO4-204ENST00000527149 SEL1L3Q68CR1 1132 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 NEK5Q6P3R8 708 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 ARMCX6Q7L4S7 300 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 PRUNE1Q86TP1 453 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 TTC7BQ86TV6 843 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 C1orf216Q8TAB5 229 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 PDCD6IPQ8WUM4 868 aaKnown RBP16.74■□□□□ 0.27
SMCO4-204ENST00000527149 DNASE2BQ8WZ79 361 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 BIRC7Q96CA5 298 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 MRGPRX2Q96LB1 330 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 EBF2Q9HAK2 575 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 PCDH9Q9HC56 1237 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 UBP1Q9NZI7 540 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 B4GALT6Q9UBX8 382 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 FAM153AQ9UHL3 310 aa16.74■□□□□ 0.27
SMCO4-204ENST00000527149 RPL26L1Q9UNX3 145 aaKnown RBP16.74■□□□□ 0.27
SMCO4-204ENST00000527149 A0A0J9YYE9 177 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 A0A1W2PQU0 124 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 PRR23AA6NEV1 266 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 NPIPB15A6NHN6 443 aaPredicted RBP16.73■□□□□ 0.27
SMCO4-204ENST00000527149 FAM47DPA6NHR8 397 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 TSPAN6O43657 245 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 RNGTTO60942 597 aaKnown RBP16.73■□□□□ 0.27
SMCO4-204ENST00000527149 PHF2O75151 1096 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 PMPCBO75439 489 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 RHOBTB1O94844 696 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 EPN2O95208 641 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 TRBC1P01850 177 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 ATXN1LP0C7T5 689 aaKnown RBP16.73■□□□□ 0.27
SMCO4-204ENST00000527149 ADRA1AP35348 466 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 COILP38432 576 aaPredicted RBP16.73■□□□□ 0.27
SMCO4-204ENST00000527149 SEMG2Q02383 582 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 FGL2Q14314 439 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 TMEM52BQ4KMG9 183 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 LYSMD4Q5XG99 296 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 KCTD11Q693B1 232 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 LAIR1Q6GTX8 287 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 ARHGEF18Q6ZSZ5 1173 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 DPPA4Q7L190 304 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 ZSCAN30Q86W11 494 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 HORMAD1Q86X24 394 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 FOXJ1Q92949 421 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 MAGOHBQ96A72 148 aaKnown RBP16.73■□□□□ 0.27
SMCO4-204ENST00000527149 LOXL4Q96JB6 756 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 FEM1CQ96JP0 617 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 PHTF1Q9UMS5 762 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 NEU2Q9Y3R4 380 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 SCN8AQ9UQD0 1980 aa16.73■□□□□ 0.27
SMCO4-204ENST00000527149 PTPRZ1P23471 2315 aaPredicted RBP16.72■□□□□ 0.27
SMCO4-204ENST00000527149 TBC1D3DA0A087WVF3 549 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 TBC1D3IA0A087WXS9 549 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 TBC1D3EA0A087X179 549 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 TBC1D3KA0A087X1G2 549 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 LOC285095A0A1B0GVY8 99 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 TBC1D3FA6NER0 549 aaPredicted RBP16.72■□□□□ 0.27
SMCO4-204ENST00000527149 CAPN8A6NHC0 703 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 TBC1D3LB9A6J9 549 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 FSBPO95073 299 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 IFNB1P01574 187 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 TBC1D3HP0C7X1 549 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 ZSCAN5DPP0CG00 497 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 GM2AP17900 193 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 CA4P22748 312 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 LHCGRP22888 699 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 ITPKAP23677 461 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 GRIA4P48058 902 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 FNTAP49354 379 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 DHPSP49366 369 aaPredicted RBP16.72■□□□□ 0.27
SMCO4-204ENST00000527149 POLR2LP62875 67 aaKnown RBP16.72■□□□□ 0.27
SMCO4-204ENST00000527149 CDK18Q07002 472 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 ELP6Q0PNE2 266 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 MPP3Q13368 585 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 GALNT3Q14435 633 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 PCSK7Q16549 785 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 QPCTQ16769 361 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 KCTD19Q17RG1 926 aaPredicted RBP16.72■□□□□ 0.27
SMCO4-204ENST00000527149 PARP6Q2NL67 630 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 TBC1D3GQ6DHY5 549 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 TBC1D3CQ6IPX1 549 aa16.72■□□□□ 0.27
SMCO4-204ENST00000527149 KIAA1161Q6NSJ0 714 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms