RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 NTAN1Q96AB6 310 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 KLC2Q9H0B6 622 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 KLQ9UEF7 1012 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 PISDQ9UG56 409 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 NOCTQ9UK39 431 aaKnown RBP16.25■□□□□ 0.19
PTPRU-210ENST00000527027 INSIG1O15503 277 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 ITGB2P05107 769 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 EPHB2P29323 1055 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 LIG3P49916 1009 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 CDR2Q01850 454 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 CYTH1Q15438 398 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 UGP2Q16851 508 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 HSP90AA4PQ58FG1 418 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 OGFOD3Q6PK18 319 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 NYAP1Q6ZVC0 841 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 SLFN11Q7Z7L1 901 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 RTL3Q8N8U3 475 aaKnown RBP16.24■□□□□ 0.19
PTPRU-210ENST00000527027 SLC30A5Q8TAD4 765 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 SLC20A1Q8WUM9 679 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 TMEM159Q96B96 161 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 HMCESQ96FZ2 354 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 WDR92Q96MX6 357 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 RBM15Q96T37 977 aaKnown RBP eCLIP16.24■□□□□ 0.19
PTPRU-210ENST00000527027 NCAPGQ9BPX3 1015 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 ARHGAP9Q9BRR9 750 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 SUV39H2Q9H5I1 410 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 PCDH12Q9NPG4 1184 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 SEPT10Q9P0V9 454 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 APPL1Q9UKG1 709 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 DAAM1Q9Y4D1 1078 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 OR1A2Q9Y585 309 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 CHD5Q8TDI0 1954 aa16.24■□□□□ 0.19
PTPRU-210ENST00000527027 TLN1Q9Y490 2541 aaKnown RBP16.23■□□□□ 0.19
PTPRU-210ENST00000527027 UBR5O95071 2799 aaPredicted RBP16.23■□□□□ 0.19
PTPRU-210ENST00000527027 RASA4BC9J798 803 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 RASA4O43374 803 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 LIPCP11150 499 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 KRT3P12035 628 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 GLB1P16278 677 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 CHRNB2P17787 502 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 RFC1P35251 1148 aaPredicted RBP16.23■□□□□ 0.19
PTPRU-210ENST00000527027 ZFP36L1Q07352 338 aaKnown RBP16.23■□□□□ 0.19
PTPRU-210ENST00000527027 SRSF6Q13247 344 aaKnown RBP16.23■□□□□ 0.19
PTPRU-210ENST00000527027 SERINC3Q13530 473 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 GRM3Q14832 879 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 ERAP2Q6P179 960 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 DNAAF5Q86Y56 855 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 CCNJLQ8IV13 435 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 PYROXD2Q8N2H3 581 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 Q8N9G6 341 aaPredicted RBP16.23■□□□□ 0.19
PTPRU-210ENST00000527027 EXTL1Q92935 676 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 C11orf70Q9BRQ4 267 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 STARD5Q9NSY2 213 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 LHX3Q9UBR4 397 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 IL17BQ9UHF5 180 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 LOXL2Q9Y4K0 774 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 DGKBQ9Y6T7 804 aa16.23■□□□□ 0.19
PTPRU-210ENST00000527027 COL12A1Q99715 3063 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 TSPAN11A1L157 253 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 GFPT2O94808 682 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 PIGNO95427 931 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 PNLIPP16233 465 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 ERCC5P28715 1186 aaPredicted RBP16.22■□□□□ 0.19
PTPRU-210ENST00000527027 FMO1Q01740 532 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 PTP4A2Q12974 167 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 MTM1Q13496 603 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 PARP15Q460N3 678 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 CERCAMQ5T4B2 595 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 UMODL1-AS1Q8N2C9 162 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 FAM46DQ8NEK8 389 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 EXOC2Q96KP1 924 aa16.22■□□□□ 0.19
PTPRU-210ENST00000527027 ZNF641Q96N77 438 aaPredicted RBP16.22■□□□□ 0.19
PTPRU-210ENST00000527027 CFAP69A5D8W1 941 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 WASH4PA8MWX3 477 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 BUB1BO60566 1050 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-210ENST00000527027 PCCBP05166 539 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 SFTPCP11686 197 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 ITIH1P19827 911 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 GPD1P21695 349 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 UBE2HP62256 183 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 EFHC2Q5JST6 749 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 MANEAQ5SRI9 462 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 CFAP58Q5T655 872 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 KCTD16Q68DU8 428 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 SCYL2Q6P3W7 929 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 BRAT1Q6PJG6 821 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 WDR59Q6PJI9 974 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 TRIM72Q6ZMU5 477 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 TAF8Q7Z7C8 310 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 ZSCAN1Q8NBB4 408 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 PLA2G15Q8NCC3 412 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 OR1E3Q8WZA6 343 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 CMKLR1Q99788 373 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 SEMA3CQ99985 751 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 CATSPERBQ9H7T0 1116 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 ADAM22Q9P0K1 906 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 LRIT1Q9P2V4 623 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 UBA2Q9UBT2 640 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-210ENST00000527027 ATP8A1Q9Y2Q0 1164 aa16.21■□□□□ 0.19
PTPRU-210ENST00000527027 RNF215Q9Y6U7 377 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms