RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 RNASEH2AO75792 299 aaKnown RBP16.62■□□□□ 0.25
CAPN1-205ENST00000526954 AGTP01019 485 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 APRTP07741 180 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 ATXN1LP0C7T5 689 aaKnown RBP16.62■□□□□ 0.25
CAPN1-205ENST00000526954 NFKBIAP25963 317 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 OXTRP30559 389 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 TNNT3P45378 269 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-205ENST00000526954 GRIA4P48058 902 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 PXNP49023 591 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-205ENST00000526954 MRPS25P82663 173 aaKnown RBP16.62■□□□□ 0.25
CAPN1-205ENST00000526954 CSTF1Q05048 431 aaKnown RBP16.62■□□□□ 0.25
CAPN1-205ENST00000526954 DMWDQ09019 674 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 SLC1A5Q15758 541 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 QPCTQ16769 361 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 NAPEPLDQ6IQ20 393 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 CCDC70Q6NSX1 233 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 C8orf74Q6P047 294 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 TSSK4Q6SA08 328 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-205ENST00000526954 PCGF5Q86SE9 256 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 LINC00523Q86TU6 105 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 NDUFAF2Q8N183 169 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 GANCQ8TET4 914 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 CPT1BQ92523 772 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 SCRN2Q96FV2 425 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 TBL1YQ9BQ87 522 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 FICDQ9BVA6 458 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 KDM4CQ9H3R0 1056 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 SGK2Q9HBY8 427 aa16.62■□□□□ 0.25
CAPN1-205ENST00000526954 TPX2Q9ULW0 747 aaKnown RBP16.62■□□□□ 0.25
CAPN1-205ENST00000526954 A0A0J9YYE9 177 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 EFCAB8A8MWE9 144 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 RIOK3O14730 519 aaKnown RBP16.61■□□□□ 0.25
CAPN1-205ENST00000526954 GALR2O43603 387 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-205ENST00000526954 PLRG1O43660 514 aaKnown RBP16.61■□□□□ 0.25
CAPN1-205ENST00000526954 TRBC1P01850 177 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 FGF1P05230 155 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 XPAP23025 273 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-205ENST00000526954 ABL2P42684 1182 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 LMAN1P49257 510 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 EPHB1P54762 984 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 DRG2P55039 364 aaKnown RBP16.61■□□□□ 0.25
CAPN1-205ENST00000526954 TAS2R38P59533 333 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 ELP6Q0PNE2 266 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 GALNT3Q14435 633 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 SPARCL1Q14515 664 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 MAP7D1Q3KQU3 841 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 SIRPB2Q5JXA9 342 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 RNASEH2BQ5TBB1 312 aaKnown RBP16.61■□□□□ 0.25
CAPN1-205ENST00000526954 DUPD1Q68J44 220 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 DENND5AQ6IQ26 1287 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 KDELC2Q7Z4H8 507 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 LONP2Q86WA8 852 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 PPIL6Q8IXY8 311 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 PAF1Q8N7H5 531 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 MCUQ8NE86 351 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 LPCAT1Q8NF37 534 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 RMDN1Q96DB5 314 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 SNF8Q96H20 258 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 MCCC1Q96RQ3 725 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-205ENST00000526954 LYSMD1Q96S90 227 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 LRFN3Q9BTN0 628 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 TPSD1Q9BZJ3 242 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 RAB17Q9H0T7 212 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 PCDH12Q9NPG4 1184 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 CD93Q9NPY3 652 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 UTP11Q9Y3A2 253 aaKnown RBP16.61■□□□□ 0.25
CAPN1-205ENST00000526954 FADS3Q9Y5Q0 445 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 NUMA1Q14980 2115 aa16.61■□□□□ 0.25
CAPN1-205ENST00000526954 IGHV1OR15-9A0A0B4J2B8 117 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 TCRBV7S3A2A0A539 114 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 BHMG1C9JSJ3 638 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-205ENST00000526954 SMAPO00193 183 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 NDC80O14777 642 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 SPINT1O43278 529 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 CHRNA4P43681 627 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 RPL21P46778 160 aaKnown RBP16.6■□□□□ 0.25
CAPN1-205ENST00000526954 FNTBP49356 437 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 ADPRHP54922 357 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 OLIG2Q13516 323 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 ANGPT1Q15389 498 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 USP39Q53GS9 565 aaKnown RBP16.6■□□□□ 0.25
CAPN1-205ENST00000526954 SYCP2LQ5T4T6 812 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 ERAP2Q6P179 960 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 USP45Q70EL2 814 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 HOOK3Q86VS8 718 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 NAT8LQ8N9F0 302 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 BBOF1Q8ND07 529 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 LRRN4CLQ8ND94 238 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 SEC14L1Q92503 715 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 SRPK1Q96SB4 655 aaKnown RBP16.6■□□□□ 0.25
CAPN1-205ENST00000526954 BTBD1Q9H0C5 482 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 MAGEE1Q9HCI5 957 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 CASS4Q9NQ75 786 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 WSB2Q9NYS7 404 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-205ENST00000526954 CYP8B1Q9UNU6 501 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 LRRK1Q38SD2 2015 aa16.6■□□□□ 0.25
CAPN1-205ENST00000526954 CAPN8A6NHC0 703 aa16.59■□□□□ 0.25
CAPN1-205ENST00000526954 C10orf142B7Z368 130 aa16.59■□□□□ 0.25
CAPN1-205ENST00000526954 AP3B1O00203 1094 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms