RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 MAATS1Q7Z4T9 603 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 RASSF3Q86WH2 238 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 CAMKK1Q8N5S9 505 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 FAM160A2Q8N612 972 aaPredicted RBP13.81□□□□□ -0.2
CD44-224ENST00000526669 FRMD1Q8N878 549 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 PIH1D2Q8WWB5 315 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 CPT1BQ92523 772 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 LRRC45Q96CN5 670 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 RMDN1Q96DB5 314 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 ECHDC3Q96DC8 303 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 FEM1CQ96JP0 617 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 TRIB3Q96RU7 358 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 NEUROG2Q9H2A3 272 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 VPS45Q9NRW7 570 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 GOLGA6AQ9NYA3 693 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 SNX24Q9Y343 169 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 ADAMTS9Q9P2N4 1935 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.8□□□□□ -0.2
CD44-224ENST00000526669 TSPAN11A1L157 253 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 GOLGA8MH3BSY2 632 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 PSMD3O43242 534 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 FZD6O60353 706 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 TMEM63AO94886 807 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 HEXIM1O94992 359 aaKnown RBP13.8□□□□□ -0.2
CD44-224ENST00000526669 NDST3O95803 873 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 ATXN1LP0C7T5 689 aaKnown RBP13.8□□□□□ -0.2
CD44-224ENST00000526669 TDGF1P13385 188 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 ADRB3P13945 408 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 ADRA1AP35348 466 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 GRIA1P42261 906 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 TNNT3P45378 269 aaPredicted RBP13.8□□□□□ -0.2
CD44-224ENST00000526669 RPL21P46778 160 aaKnown RBP13.8□□□□□ -0.2
CD44-224ENST00000526669 KCNJ11Q14654 390 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 QPCTQ16769 361 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 SIRPB2Q5JXA9 342 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 PPP1R21Q6ZMI0 780 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 TTC7BQ86TV6 843 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 KLHDC8BQ8IXV7 354 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 OR52K1Q8NGK4 314 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 OR14C36Q8NHC7 312 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 LRFN3Q9BTN0 628 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 LRRC40Q9H9A6 602 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 PCDH12Q9NPG4 1184 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 USP36Q9P275 1121 aaKnown RBP13.8□□□□□ -0.2
CD44-224ENST00000526669 DKK3Q9UBP4 350 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 PHTF1Q9UMS5 762 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 NCKAP1Q9Y2A7 1128 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 TMEM131Q92545 1883 aa13.8□□□□□ -0.2
CD44-224ENST00000526669 KNL1Q8NG31 2342 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 ESYT3A0FGR9 886 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 FAM47DPA6NHR8 397 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 DLL1O00548 723 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 SPINT1O43278 529 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 SLC4A1P02730 911 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 RHOXF2BP0C7M4 288 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 IVDP26440 423 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 ITGA8P53708 1063 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 FAM193AP78312 1265 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 ZBTB16Q05516 673 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 MTM1Q13496 603 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 ANGPT1Q15389 498 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 TRADDQ15628 312 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 SLC1A5Q15758 541 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 UGP2Q16851 508 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 BRAT1Q6PJG6 821 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 MAMSTRQ6ZN01 415 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 CCHCR1Q8TD31 782 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 SNF8Q96H20 258 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 PPP1R2P1Q96PQ5 205 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 RHOXF2Q9BQY4 288 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 ERP44Q9BS26 406 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 HDAC8Q9BY41 377 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 ITM2CQ9NQX7 267 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 B4GALT6Q9UBX8 382 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 DMGDHQ9UI17 866 aaKnown RBP13.79□□□□□ -0.2
CD44-224ENST00000526669 TPX2Q9ULW0 747 aaKnown RBP13.79□□□□□ -0.2
CD44-224ENST00000526669 SCML1Q9UN30 329 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 ZFC3H1O60293 1989 aaKnown RBP13.79□□□□□ -0.2
CD44-224ENST00000526669 CACNA1HO95180 2353 aa13.79□□□□□ -0.2
CD44-224ENST00000526669 IGHV1OR15-9A0A0B4J2B8 117 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 A0A0J9YYE9 177 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 LOC285095A0A1B0GVY8 99 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 NPIPB15A6NHN6 443 aaPredicted RBP13.78□□□□□ -0.2
CD44-224ENST00000526669 GOLGA8CPA6NN73 597 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 ANKRD66B4E2M5 251 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 NEMP1O14524 444 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 RIOK3O14730 519 aaKnown RBP13.78□□□□□ -0.2
CD44-224ENST00000526669 SLU7O95391 586 aaKnown RBP13.78□□□□□ -0.2
CD44-224ENST00000526669 TRBC1P01850 177 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 TPH1P17752 444 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 HLA-DPA1P20036 260 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 TPSB2P20231 275 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 ACSL1P33121 698 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 ADPRHP54922 357 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 TAS2R38P59533 333 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 GUCY2DQ02846 1103 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 SRSF5Q13243 272 aaKnown RBP13.78□□□□□ -0.2
CD44-224ENST00000526669 TPSAB1Q15661 275 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 MAP7D1Q3KQU3 841 aa13.78□□□□□ -0.2
CD44-224ENST00000526669 RNASEH2BQ5TBB1 312 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms