RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 MTRF1LQ9UGC7 380 aaKnown RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 VPS4AQ9UN37 437 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 CNTN6Q9UQ52 1028 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 ZBTB1Q9Y2K1 713 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 ZNF711Q9Y462 761 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 ATP6V1DQ9Y5K8 247 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 HEMK1Q9Y5R4 338 aaPredicted RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 V9GYY5 206 aaPredicted RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 SUPT6HQ7KZ85 1726 aaKnown RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 SIGLEC1Q9BZZ2 1709 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 CDC42BPBQ9Y5S2 1711 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 ITSN2Q9NZM3 1697 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 ABCA6Q8N139 1617 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 ZFYVE16Q7Z3T8 1539 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 DENND4BO75064 1496 aaPredicted RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 NEO1Q92859 1461 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 BRD4O60885 1362 aaPredicted RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 GAKO14976 1311 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 EMSYQ7Z589 1322 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 RAD50Q92878 1312 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 ZNF335Q9H4Z2 1342 aaPredicted RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 A0A0G2JPF8 293 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 A0A1B0GVC2 190 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 CTAGE9A4FU28 777 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 RRN3P2A6NIE6 340 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 HNRNPCL3B7ZW38 293 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 ADAM10O14672 748 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 MCF2LO15068 1137 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 NCAM2O15394 837 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 P4HA2O15460 535 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 HSPA4LO95757 839 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 STARD3NLO95772 234 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 DDX58O95786 925 aaKnown RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 SERPINC1P01008 464 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 TFRCP02786 760 aaKnown RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 DNTTP04053 509 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 DHRS4L1P0CG22 281 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 HNRNPCL4P0DMR1 293 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 ZNF24P17028 368 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 KLRK1P26718 216 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 ALDH1B1P30837 517 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 CA8P35219 290 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 HADHAP40939 763 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 SKIV2L2P42285 1042 aaKnown RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 MTHFRP42898 656 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 MSH2P43246 934 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 VPS41P49754 854 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 ETV1P50549 477 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 RCAN1P53805 252 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 HSF1Q00613 529 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 RUNX1T1Q06455 604 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 KRT71Q3SY84 523 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 TTC39AQ5SRH9 613 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 CCDC183Q5T5S1 534 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 TTC22Q5TAA0 569 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 CCDC30Q5VVM6 783 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 OLFM4Q6UX06 510 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 RANBP10Q6VN20 620 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 SLC39A5Q6ZMH5 540 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 ZNF813Q6ZN06 617 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 Q6ZTC4 211 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 FAM47EQ6ZV65 393 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 ENOSF1Q7L5Y1 443 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 DGLUCYQ7Z3D6 616 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 PPP1R42Q7Z4L9 355 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 TRIML2Q8N7C3 387 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 SPERTQ8NA61 448 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 FAM47BQ8NA70 645 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 BBOF1Q8ND07 529 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 RFWD2Q8NHY2 731 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 OTUD7AQ8TE49 926 aaPredicted RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 DNAAF4Q8WXU2 420 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 NPIPB3Q92617 1050 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 CDKL2Q92772 493 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 CASP10Q92851 521 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 USP13Q92995 863 aaPredicted RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 DHX58Q96C10 678 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 VCPIP1Q96JH7 1222 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 MARK4Q96L34 752 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 RBM14Q96PK6 669 aaKnown RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 SLX1AQ9BQ83 275 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 PYM1Q9BRP8 204 aaKnown RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 UQCC2Q9BRT2 126 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 TAF1DQ9H5J8 278 aaPredicted RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 SFXN1Q9H9B4 322 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 SAP30LQ9HAJ7 183 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 NOD2Q9HC29 1040 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 FSCN3Q9NQT6 498 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 SPATS2LQ9NUQ6 558 aaKnown RBP3.3□□□□□ -1.88
COPB1-205ENST00000526527 ASNSD1Q9NWL6 643 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 IL1RAPL1Q9NZN1 696 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 EMC3Q9P0I2 261 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 GRHPRQ9UBQ7 328 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 SATB2Q9UPW6 733 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 PRELID1Q9Y255 219 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 TMEM98Q9Y2Y6 226 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 JRKLQ9Y4A0 524 aa3.3□□□□□ -1.88
COPB1-205ENST00000526527 CFAP74Q9C0B2 1584 aa3.29□□□□□ -1.88
COPB1-205ENST00000526527 DIP2CQ9Y2E4 1556 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms