RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 RBM15Q96T37 977 aaKnown RBP eCLIP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 NAPGQ99747 312 aaPredicted RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 ORAI3Q9BRQ5 295 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 TMEM121Q9BTD3 319 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 TDRD1Q9BXT4 1180 aaKnown RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 EBF2Q9HAK2 575 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 TMEM74BQ9NUR3 256 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 GGT7Q9UJ14 662 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 GMEB2Q9UKD1 530 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PILRBQ9UKJ0 227 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PHTF1Q9UMS5 762 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 ZFR2Q9UPR6 939 aaKnown RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 ITM2BQ9Y287 266 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PPIL1Q9Y3C6 166 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 EP300Q09472 2414 aaPredicted RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 TRPM6Q9BX84 2022 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 DOCK9Q9BZ29 2069 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 A0A1W2PQU0 124 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 CTAGE9A4FU28 777 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 CFAP69A5D8W1 941 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 NEMP1O14524 444 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 FANCGO15287 622 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 OPHN1O60890 802 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 MT-CYBP00156 380 aaPredicted RBP13.01□□□□□ -0.33
SMPD1-202ENST00000526280 CPP00450 1065 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 PRKCGP05129 697 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 TCP1P17987 556 aaKnown RBP13.01□□□□□ -0.33
SMPD1-202ENST00000526280 NFKB1P19838 968 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 CA4P22748 312 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 CD27P26842 260 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 STIP1P31948 543 aaKnown RBP13.01□□□□□ -0.33
SMPD1-202ENST00000526280 HOXD12P35452 270 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 DPP6P42658 865 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 RPS21P63220 83 aaKnown RBP13.01□□□□□ -0.33
SMPD1-202ENST00000526280 SNX1Q13596 522 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 ZNF284Q2VY69 593 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 TMEM52BQ4KMG9 183 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 TMEM259Q4ZIN3 620 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 PLA2G2CQ5R387 149 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 KIAA1161Q6NSJ0 714 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 ERAP2Q6P179 960 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 RGL4Q8IZJ4 473 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 SPATA22Q8NHS9 363 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 C1orf216Q8TAB5 229 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 ACTRT1Q8TDG2 376 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 SNX19Q92543 992 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 RUBCNQ92622 972 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 PIGKQ92643 395 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 RTP4Q96DX8 246 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 SPATA13Q96N96 652 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 NAP1L3Q99457 506 aaPredicted RBP13.01□□□□□ -0.33
SMPD1-202ENST00000526280 ARRDC1-AS1Q9H2J1 176 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 HOMER3Q9NSC5 361 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 NCDNQ9UBB6 729 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 EIF2B4Q9UI10 523 aaKnown RBP13.01□□□□□ -0.33
SMPD1-202ENST00000526280 CHKBQ9Y259 395 aa13.01□□□□□ -0.33
SMPD1-202ENST00000526280 DRG1Q9Y295 367 aaKnown RBP13.01□□□□□ -0.33
SMPD1-202ENST00000526280 PI4KAP42356 2102 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 A0A1W2PPC4 97 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 PGRMC1O00264 195 aaKnown RBP13□□□□□ -0.33
SMPD1-202ENST00000526280 ZNF185O15231 689 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 GCATO75600 419 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 ITGAVP06756 1048 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 MAT2AP31153 395 aaKnown RBP13□□□□□ -0.33
SMPD1-202ENST00000526280 NUDT1P36639 197 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 MMP12P39900 470 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 MPLP40238 635 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 GDF10P55107 478 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 RPL26P61254 145 aaKnown RBP13□□□□□ -0.33
SMPD1-202ENST00000526280 ETF1P62495 437 aaKnown RBP13□□□□□ -0.33
SMPD1-202ENST00000526280 FAM193AP78312 1265 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 SEL1L3Q68CR1 1132 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 ITPRIPL1Q6GPH6 555 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 DPPA4Q7L190 304 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 PRELID2Q8N945 189 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 CCDC110Q8TBZ0 833 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 SCRN2Q96FV2 425 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 OXNAD1Q96HP4 312 aaPredicted RBP13□□□□□ -0.33
SMPD1-202ENST00000526280 TRIB3Q96RU7 358 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 C1QTNF2Q9BXJ5 285 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 MIR1-1HGQ9H1L0 117 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 GBA3Q9H227 469 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 PCDH9Q9HC56 1237 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 VPS45Q9NRW7 570 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 UBP1Q9NZI7 540 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 FAM153AQ9UHL3 310 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 RSPH14Q9UHP6 348 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 RPL26L1Q9UNX3 145 aaKnown RBP13□□□□□ -0.33
SMPD1-202ENST00000526280 ZNF148Q9UQR1 794 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 RALGAPA1Q6GYQ0 2036 aa13□□□□□ -0.33
SMPD1-202ENST00000526280 FAM186AA6NE01 2351 aa12.99□□□□□ -0.33
SMPD1-202ENST00000526280 IGLON5A6NGN9 336 aa12.99□□□□□ -0.33
SMPD1-202ENST00000526280 MMP20O60882 483 aa12.99□□□□□ -0.33
SMPD1-202ENST00000526280 LRP3O75074 770 aa12.99□□□□□ -0.33
SMPD1-202ENST00000526280 PMPCBO75439 489 aa12.99□□□□□ -0.33
SMPD1-202ENST00000526280 TUBB4AP04350 444 aa12.99□□□□□ -0.33
SMPD1-202ENST00000526280 NFKBIAP25963 317 aa12.99□□□□□ -0.33
SMPD1-202ENST00000526280 EPHB1P54762 984 aa12.99□□□□□ -0.33
SMPD1-202ENST00000526280 SEMG2Q02383 582 aa12.99□□□□□ -0.33
SMPD1-202ENST00000526280 CDK18Q07002 472 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms