RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 RFTN1Q14699 578 aaPredicted RBP10.26□□□□□ -0.77
VPS28-204ENST00000526054 PPP2R5EQ16537 467 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 SOWAHCQ53LP3 525 aaPredicted RBP10.26□□□□□ -0.77
VPS28-204ENST00000526054 TFDP3Q5H9I0 405 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 TMCO4Q5TGY1 634 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 SLC9A4Q6AI14 798 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 TIGD7Q6NT04 549 aaPredicted RBP10.26□□□□□ -0.77
VPS28-204ENST00000526054 MFSD7Q6UXD7 560 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 LEKR1Q6ZMV7 388 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 LRRC49Q8IUZ0 686 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 BBS5Q8N3I7 341 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 PQLC3Q8N755 202 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 NETO2Q8NC67 525 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 NSMCE1Q8WV22 266 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 ISG20Q96AZ6 181 aaKnown RBP10.26□□□□□ -0.77
VPS28-204ENST00000526054 GDAP1L1Q96MZ0 367 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 MYOCQ99972 504 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 CINPQ9BW66 212 aaPredicted RBP10.26□□□□□ -0.77
VPS28-204ENST00000526054 KCNF1Q9H3M0 494 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 PDFQ9HBH1 243 aa10.26□□□□□ -0.77
VPS28-204ENST00000526054 URB1O60287 2271 aaKnown RBP10.26□□□□□ -0.77
VPS28-204ENST00000526054 ANKRD36A6QL64 1941 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 hCG_1818297A0A087WSY0 165 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 J3KR12 359 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 KPNA3O00505 521 aaPredicted RBP10.25□□□□□ -0.77
VPS28-204ENST00000526054 RNGTTO60942 597 aaKnown RBP10.25□□□□□ -0.77
VPS28-204ENST00000526054 PRNPP04156 253 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 PRLRP16471 622 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 CKMT2P17540 419 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 GARSP41250 739 aaKnown RBP10.25□□□□□ -0.77
VPS28-204ENST00000526054 TAS2R38P59533 333 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 DYNLT1P63172 113 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 GBE1Q04446 702 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 RAD51Q06609 339 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 TARDBPQ13148 414 aaKnown RBP eCLIP10.25□□□□□ -0.77
VPS28-204ENST00000526054 ILKQ13418 452 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 ZNF235Q14590 738 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 TAZQ16635 292 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 CARD16Q5EG05 197 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 PIP5KL1Q5T9C9 394 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 FBXL19Q6PCT2 694 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 ARHGAP36Q6ZRI8 547 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 BZW1Q7L1Q6 419 aaKnown RBP10.25□□□□□ -0.77
VPS28-204ENST00000526054 KANSL1Q7Z3B3 1105 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 PLPP6Q8IY26 295 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 RYBPQ8N488 228 aaPredicted RBP10.25□□□□□ -0.77
VPS28-204ENST00000526054 PLD5Q8N7P1 536 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 TRIM58Q8NG06 486 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 OR2AP1Q8NGE2 309 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 OR2A12Q8NGT7 310 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 GRIN3AQ8TCU5 1115 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 CRELD1Q96HD1 420 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 ZNF599Q96NL3 588 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 TM6SF2Q9BZW4 377 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 TNKS2Q9H2K2 1166 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 DYRK4Q9NR20 520 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 HAUS2Q9NVX0 235 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 SEPT3Q9UH03 358 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 CA5BQ9Y2D0 317 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 ACTL7AQ9Y615 435 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 AK5Q9Y6K8 562 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 IGSF10Q6WRI0 2623 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 KNTC1P50748 2209 aa10.25□□□□□ -0.77
VPS28-204ENST00000526054 ARID1BQ8NFD5 2236 aaPredicted RBP10.24□□□□□ -0.77
VPS28-204ENST00000526054 A0A1W2PQU0 124 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 EIF4E1BA6NMX2 242 aaKnown RBP10.24□□□□□ -0.77
VPS28-204ENST00000526054 PPP1R12AO14974 1030 aaPredicted RBP10.24□□□□□ -0.77
VPS28-204ENST00000526054 SLC31A1O15431 190 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 CST8O60676 142 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 MAP3K6O95382 1288 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 CTSLP07711 333 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 THEGLP0DJG4 465 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 TGM2P21980 687 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 CHRNA3P32297 505 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 PTPN7P35236 360 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 HSPA9P38646 679 aaKnown RBP10.24□□□□□ -0.77
VPS28-204ENST00000526054 PEX5P50542 639 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 RENBPP51606 427 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 CCNHP51946 323 aaPredicted RBP10.24□□□□□ -0.77
VPS28-204ENST00000526054 DAB2P98082 770 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 SEMG2Q02383 582 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 CCDC15Q0P6D6 951 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 LBRQ14739 615 aaKnown RBP10.24□□□□□ -0.77
VPS28-204ENST00000526054 PDK1Q15118 436 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 PROX2Q3B8N5 592 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 CCDC181Q5TID7 509 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 KAZNQ674X7 775 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 DPY19L3Q6ZPD9 716 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 TP53INP2Q8IXH6 220 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 TMEM145Q8NBT3 493 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 TMIEQ8NEW7 156 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 KLK6Q92876 244 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 HDAC11Q96DB2 347 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 KLHDC7BQ96G42 594 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 HES6Q96HZ4 224 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 PPP1R16AQ96I34 528 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 HEPHQ9BQS7 1158 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 OSBPL8Q9BZF1 889 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 NRSN2Q9GZP1 204 aa10.24□□□□□ -0.77
VPS28-204ENST00000526054 ZDHHC6Q9H6R6 413 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms