RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 LUZP1Q86V48 1076 aa12.62□□□□□ -0.39
CCDC90B-205ENST00000525916 CREBRFQ8IUR6 639 aa12.62□□□□□ -0.39
CCDC90B-205ENST00000525916 FAM26EQ8N5C1 309 aa12.62□□□□□ -0.39
CCDC90B-205ENST00000525916 PMEPA1Q969W9 287 aa12.62□□□□□ -0.39
CCDC90B-205ENST00000525916 ISG20Q96AZ6 181 aaKnown RBP12.62□□□□□ -0.39
CCDC90B-205ENST00000525916 PDXPQ96GD0 296 aa12.62□□□□□ -0.39
CCDC90B-205ENST00000525916 TBCBQ99426 244 aa12.62□□□□□ -0.39
CCDC90B-205ENST00000525916 KLQ9UEF7 1012 aa12.62□□□□□ -0.39
CCDC90B-205ENST00000525916 APPL1Q9UKG1 709 aa12.62□□□□□ -0.39
CCDC90B-205ENST00000525916 USP9XQ93008 2570 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-205ENST00000525916 CCL4P13236 92 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 ATP1A3P13637 1013 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 PEX5P50542 639 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 ATP1A2P50993 1020 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 ARSDP51689 593 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 COPB1P53618 953 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 TMEM164Q5U3C3 297 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 LEKR1Q6ZMV7 388 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 ZNF397Q8NF99 534 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 OR2AP1Q8NGE2 309 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 ARHGEF2Q92974 986 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 NKD1Q969G9 470 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 C1orf74Q96LT6 269 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 RBM15Q96T37 977 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 OSBPL1AQ9BXW6 950 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 ZYG11BQ9C0D3 744 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 RDH14Q9HBH5 336 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 ZNF71Q9NQZ8 489 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 NDFIP2Q9NV92 336 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 TAB2Q9NYJ8 693 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 RRN3Q9NYV6 651 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 TUBD1Q9UJT1 453 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 ANAPC2Q9UJX6 822 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 STAP1Q9ULZ2 295 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 PCDHGC3Q9UN70 934 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 PLAAQ9Y263 795 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 OR1A2Q9Y585 309 aa12.61□□□□□ -0.39
CCDC90B-205ENST00000525916 MYO9AB2RTY4 2548 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 FAM170AA1A519 330 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 TMEM110-MUSTN1A8MSY1 372 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 B4DGG1 531 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 POP4O95707 220 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 GSRP00390 522 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 LIFP15018 202 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 CDK11BP21127 795 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 HTR1BP28222 390 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 CCR10P46092 362 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 SNRPD1P62314 119 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 ARHGEF7Q14155 803 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 LRRC14Q15048 493 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 POLD3Q15054 466 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 ARHGAP44Q17R89 818 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 WSCD2Q2TBF2 565 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 MYLK3Q32MK0 819 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 EFHC2Q5JST6 749 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 SMYD5Q6GMV2 418 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 DPY19L2P1Q6NXN4 242 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 GDPD4Q6W3E5 623 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 GBP6Q6ZN66 633 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 IL22RA1Q8N6P7 574 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 NETO2Q8NC67 525 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 RCBTB1Q8NDN9 531 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 FAM46DQ8NEK8 389 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 ANKRD20A12PQ8NF67 263 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 NT5C3BQ969T7 300 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 PGAP3Q96FM1 320 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 APOOQ9BUR5 198 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 VPS16Q9H269 839 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 SYNCQ9H7C4 482 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 PLCB1Q9NQ66 1216 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 LRIT1Q9P2V4 623 aa12.6□□□□□ -0.39
CCDC90B-205ENST00000525916 LGALS16A8MUM7 142 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 TNFP01375 233 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 PCCBP05166 539 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 PNLIPP16233 465 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 SLC9A1P19634 815 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 PON1P27169 355 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 B4GALNT1Q00973 533 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 APBA1Q02410 837 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 HLTFQ14527 1009 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 INPP5AQ14642 412 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 EXOC3L4Q17RC7 722 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 AMZ1Q400G9 498 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 C14orf28Q4W4Y0 310 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 TRIM65Q6PJ69 517 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 OGFOD3Q6PK18 319 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 TAF8Q7Z7C8 310 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 FAM131BQ86XD5 332 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 C9orf43Q8TAL5 461 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 OR1E3Q8WZA6 343 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 WDR92Q96MX6 357 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 CRACR2AQ9BSW2 395 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 B3GNT4Q9C0J1 378 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 LRRC4CQ9HCJ2 640 aa12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 MRPL40Q9NQ50 206 aaKnown RBP12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 AKAP7Q9P0M2 348 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 TNRC6AQ8NDV7 1962 aaKnown RBP12.59□□□□□ -0.39
CCDC90B-205ENST00000525916 NOTCH2Q04721 2471 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms