RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.32□□□□□ -1.88
CSDE1-209ENST00000525132 MYO1AQ9UBC5 1043 aa3.32□□□□□ -1.88
CSDE1-209ENST00000525132 PI4KBQ9UBF8 816 aa3.32□□□□□ -1.88
CSDE1-209ENST00000525132 SEL1LQ9UBV2 794 aa3.32□□□□□ -1.88
CSDE1-209ENST00000525132 SLC39A10Q9ULF5 831 aa3.32□□□□□ -1.88
CSDE1-209ENST00000525132 PCDHA6Q9UN73 950 aa3.32□□□□□ -1.88
CSDE1-209ENST00000525132 SEC16AO15027 2179 aa3.32□□□□□ -1.88
CSDE1-209ENST00000525132 RNF213Q63HN8 5207 aa3.32□□□□□ -1.88
CSDE1-209ENST00000525132 CMYA5Q8N3K9 4069 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 POLEQ07864 2286 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 PTPRDP23468 1912 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 KDM3AQ9Y4C1 1321 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 LCE6AA0A183 80 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 A0A1W2PRG0 241 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 A6NLC8 198 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 TISP43B9A030 160 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 B9A039 149 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 HNRNPDLO14979 420 aaKnown RBP3.31□□□□□ -1.88
CSDE1-209ENST00000525132 NPC1O15118 1278 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 TEX28O15482 410 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 PJA2O43164 708 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 PROM1O43490 865 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 CSO75390 466 aaKnown RBP3.31□□□□□ -1.88
CSDE1-209ENST00000525132 TNFSF15O95150 251 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 ARIH2O95376 493 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 THEGLP0DJG4 465 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 XBP1P17861 261 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 CASTP20810 708 aaKnown RBP3.31□□□□□ -1.88
CSDE1-209ENST00000525132 FGFR2P21802 821 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 NR4A1P22736 598 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 DDX6P26196 483 aaKnown RBP eCLIP3.31□□□□□ -1.884e-6■□□□□ 10
CSDE1-209ENST00000525132 PCSK1P29120 753 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 SERPINF1P36955 418 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 SPAM1P38567 509 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 VIPR2P41587 438 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 QARSP47897 775 aaKnown RBP3.31□□□□□ -1.88
CSDE1-209ENST00000525132 TUBP50607 506 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 TERF1P54274 439 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 NPEPPSP55786 919 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 DUSP2Q05923 314 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 FOXO1Q12778 655 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 SP140Q13342 867 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 MTM1Q13496 603 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 SPARCL1Q14515 664 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 ELAVL1Q15717 326 aaKnown RBP3.31□□□□□ -1.88
CSDE1-209ENST00000525132 TIGD6Q17RP2 521 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 BMT2Q1RMZ1 405 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 NADK2Q4G0N4 442 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 HS1BP3Q53T59 392 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 TMEM196Q5HYL7 178 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 KHDC1LQ5JSQ8 128 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 AGAP9Q5VTM2 703 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 ANKS6Q68DC2 871 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 IGFL4Q6B9Z1 124 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 ITPRIPL1Q6GPH6 555 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 IL27RAQ6UWB1 636 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 FAM180AQ6UWF9 173 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 Q6ZPA2 131 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 TMPRSS9Q7Z410 1059 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 HIPK1Q86Z02 1210 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 OR8H2Q8N162 312 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 ITLN2Q8WWU7 325 aaPredicted RBP3.31□□□□□ -1.88
CSDE1-209ENST00000525132 ASB12Q8WXK4 309 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 ST8SIA2Q92186 375 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 FEM1CQ96JP0 617 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 MAELQ96JY0 434 aaKnown RBP3.31□□□□□ -1.88
CSDE1-209ENST00000525132 CASD1Q96PB1 797 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 SERINC2Q96SA4 455 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 BARD1Q99728 777 aaKnown RBP3.31□□□□□ -1.88
CSDE1-209ENST00000525132 TMEM121Q9BTD3 319 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 CNPPD1Q9BV87 410 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 VN1R3Q9BXE9 311 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 STK33Q9BYT3 514 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 ZNF696Q9H7X3 374 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 FBRSL1Q9HCM7 1045 aaKnown RBP3.31□□□□□ -1.88
CSDE1-209ENST00000525132 SARS2Q9NP81 518 aaKnown RBP3.31□□□□□ -1.88
CSDE1-209ENST00000525132 UBN1Q9NPG3 1134 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 RIC8AQ9NPQ8 531 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 WASH6PQ9NQA3 447 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 TDP1Q9NUW8 608 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 AURKAIP1Q9NWT8 199 aaPredicted RBP3.31□□□□□ -1.88
CSDE1-209ENST00000525132 HCFC1R1Q9NWW0 138 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 IRAK4Q9NWZ3 460 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 COL20A1Q9P218 1284 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 ABCF2Q9UG63 623 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 SLC23A1Q9UHI7 598 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 SLC13A4Q9UKG4 626 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 NOL7Q9UMY1 257 aaKnown RBP3.31□□□□□ -1.88
CSDE1-209ENST00000525132 TMEM98Q9Y2Y6 226 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 PCDHA1Q9Y5I3 950 aa3.31□□□□□ -1.88
CSDE1-209ENST00000525132 TLCD2A6NGC4 264 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 CAPN14A8MX76 684 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 CXorf49A8MYA2 514 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-209ENST00000525132 AHRRA9YTQ3 701 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 B4E171 279 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 B5MCH6 92 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 IPO5O00410 1097 aaKnown RBP3.3□□□□□ -1.88
CSDE1-209ENST00000525132 ACKR2O00590 384 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 SGTAO43765 313 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 AKR1B10O60218 316 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms