RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PLA2G15Q8NCC3 412 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 OR2T34Q8NGX1 318 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 NKD2Q969F2 451 aaPredicted RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 MAGOHBQ96A72 148 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 FUBP1Q96AE4 644 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 RMDN1Q96DB5 314 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 IMP4Q96G21 291 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 PPP1R16AQ96I34 528 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 SERAC1Q96JX3 654 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 PBKQ96KB5 322 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 SPATA13Q96N96 652 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 PRRX2Q99811 253 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 TDRD1Q9BXT4 1180 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 FAM126AQ9BYI3 521 aaPredicted RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 CPEB1Q9BZB8 566 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 DDX47Q9H0S4 455 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 ABCG8Q9H221 673 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 EPC1Q9H2F5 836 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 SEMA4AQ9H3S1 761 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 SUDS3Q9H7L9 328 aaPredicted RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 FBRSQ9HAH7 460 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 SGK2Q9HBY8 427 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 PCDH9Q9HC56 1237 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 BPIFA1Q9NP55 256 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 PARD6AQ9NPB6 346 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 MBNL1Q9NR56 388 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 NCDNQ9UBB6 729 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 B4GALT6Q9UBX8 382 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 CD84Q9UIB8 345 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 RAB23Q9ULC3 237 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 TTC7AQ9ULT0 858 aaPredicted RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 FZD4Q9ULV1 537 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 SHOC2Q9UQ13 582 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 EFR3BQ9Y2G0 817 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 KCTD3Q9Y597 815 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 SPO11Q9Y5K1 396 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 A0A1B0GVT2 93 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 TCRBV7S3A2A0A539 114 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 GOLGA6CA6NDK9 693 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 GOLGA6BA6NDN3 693 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 POM121BA6NF01 834 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 C5orf60A6NFR6 353 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 GOLGA8MH3BSY2 632 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 K7ESM1 405 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 PGRMC1O00264 195 aaKnown RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 CCL22O00626 93 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 RIOK3O14730 519 aaKnown RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 AREL1O15033 823 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 GPR39O43194 453 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 HTRA2O43464 458 aaPredicted RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 LZTS3O60299 673 aaPredicted RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 FZD6O60353 706 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 GFRA3O60609 400 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 RECQL5O94762 991 aaPredicted RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 STK10O94804 968 aaKnown RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 RHOBTB1O94844 696 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 CLDN7O95471 211 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 PCCBP05166 539 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 C1SP09871 688 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 GOLGA6DP0CG33 693 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 C6P13671 934 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 GM2AP17900 193 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 TCP1P17987 556 aaKnown RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 MSNP26038 577 aaKnown RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 OXTRP30559 389 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 VIPR1P32241 457 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 CNR2P34972 360 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 DEKP35659 375 aaKnown RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 COILP38432 576 aaPredicted RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 HSPA9P38646 679 aaKnown RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 MMP12P39900 470 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 ETV3P41162 512 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 IRX4P78413 519 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 BASP1P80723 227 aaKnown RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 TMPRSS15P98073 1019 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 IL9RQ01113 521 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 BNC1Q01954 994 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 CDK18Q07002 472 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 SGCGQ13326 291 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 OASLQ15646 514 aaKnown RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 CNGA3Q16281 694 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 CCNG2Q16589 344 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 TRIM61Q5EBN2 209 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 SIRPB2Q5JXA9 342 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 TPRG1LQ5T0D9 272 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF648Q5T619 568 aaPredicted RBP4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 ALS2CLQ60I27 953 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 LRRC66Q68CR7 880 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 KCTD16Q68DU8 428 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 LAIR1Q6GTX8 287 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 BRAT1Q6PJG6 821 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 CRTC1Q6UUV9 634 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 LIPIQ6XZB0 460 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 ARHGEF18Q6ZSZ5 1173 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 Q6ZVL8 140 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 LYSMD3Q7Z3D4 306 aa4.62□□□□□ -1.67
CHMP4A-202ENST00000524955 HSD11B1LQ7Z5J1 315 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms