RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CHSY1Q86X52 802 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 TMEM25Q86YD3 366 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 LMNTD2Q8IXW0 634 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 ADGRG2Q8IZP9 1017 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 TEX26Q8N6G2 289 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 KIAA1958Q8N8K9 716 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 DENND1AQ8TEH3 1009 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 NSMCE1Q8WV22 266 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 CKAP2Q8WWK9 683 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 SCG3Q8WXD2 468 aaKnown RBP7.16□□□□□ -1.26
VPS11-201ENST00000524454 ISL2Q96A47 359 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 MAGEB18Q96M61 343 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 PWWP2AQ96N64 755 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 CCT8L2Q96SF2 557 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 SLC25A51Q9H1U9 297 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 MAGEH1Q9H213 219 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 TRABDQ9H4I3 376 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 C10orf88Q9H8K7 445 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 SAMD15Q9P1V8 674 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 SFMBT1Q9UHJ3 866 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 RSPH14Q9UHP6 348 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 CHMP2BQ9UQN3 213 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 USP34Q70CQ2 3546 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 SLC12A8A0AV02 714 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 E2F8A0AVK6 867 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 PRR23AA6NEV1 266 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 CHURC1-FNTBB4DL54 471 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 NEDD8-MDP1E9PL57 170 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 F5H5T6 163 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 KCNK1O00180 336 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 KLF11O14901 512 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 RAMP2O60895 175 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 STC2O76061 302 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 PAPSS2O95340 614 aaPredicted RBP7.15□□□□□ -1.26
VPS11-201ENST00000524454 ASMTLO95671 621 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 EPOP01588 193 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 KLKB1P03952 638 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 TDGF1P13385 188 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 SSTR1P30872 391 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 NBL1P41271 181 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 MAGEA9P43362 315 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 CXCL12P48061 93 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 FNTBP49356 437 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 CSE1LP55060 971 aaKnown RBP7.15□□□□□ -1.26
VPS11-201ENST00000524454 CDH4P55283 916 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 MGAT5Q09328 741 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 NIPAL4Q0D2K0 466 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 ZBTB17Q13105 803 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 SPARCL1Q14515 664 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 ITIH4Q14624 930 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 CRYMQ14894 314 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 LPAL2Q16609 132 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 PDK4Q16654 411 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 KBTBD12Q3ZCT8 623 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 C2orf27AQ580R0 203 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 RALGPS1Q5JS13 557 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 DGKKQ5KSL6 1271 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 UBAP2Q5T6F2 1119 aaKnown RBP7.15□□□□□ -1.26
VPS11-201ENST00000524454 CCDC91Q7Z6B0 441 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 GALNT7Q86SF2 657 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 SETD3Q86TU7 594 aaPredicted RBP7.15□□□□□ -1.26
VPS11-201ENST00000524454 TAX1BP1Q86VP1 789 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 ANKMY2Q8IV38 441 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 FAM217AQ8IXS0 508 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 SRRM1Q8IYB3 904 aaKnown RBP7.15□□□□□ -1.26
VPS11-201ENST00000524454 AGGF1Q8N302 714 aaeCLIP7.15□□□□□ -1.26
VPS11-201ENST00000524454 BBS5Q8N3I7 341 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 CCDC33Q8N5R6 958 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 BANPQ8N9N5 519 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 RPLP0P6Q8NHW5 317 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 TADA1Q96BN2 335 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 MSANTD3Q96H12 275 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 APOPT1Q96IL0 206 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 CABS1Q96KC9 395 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 HHIPQ96QV1 700 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 RANBP9Q96S59 729 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 C19orf43Q9BQ61 176 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 SELENOSQ9BQE4 189 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 KIFC1Q9BW19 673 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 VPS11Q9H270 941 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 PLAC1Q9HBJ0 212 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 GLOD4Q9HC38 313 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 ATP13A1Q9HD20 1204 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 PRMT8Q9NR22 394 aaPredicted RBP7.15□□□□□ -1.26
VPS11-201ENST00000524454 TMPRSS4Q9NRS4 437 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 DNAJC17Q9NVM6 304 aaKnown RBP7.15□□□□□ -1.26
VPS11-201ENST00000524454 PLK2Q9NYY3 685 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 IPO11Q9UI26 975 aaKnown RBP7.15□□□□□ -1.26
VPS11-201ENST00000524454 LSM7Q9UK45 103 aaKnown RBP7.15□□□□□ -1.26
VPS11-201ENST00000524454 RIMKLBQ9ULI2 386 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 SOX13Q9UN79 622 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 ZNF510Q9Y2H8 683 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 MFHAS1Q9Y4C4 1052 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 FAM169AQ9Y6X4 670 aa7.15□□□□□ -1.26
VPS11-201ENST00000524454 DOCK4Q8N1I0 1966 aa7.15□□□□□ -1.27
VPS11-201ENST00000524454 A0A1B0GVM2 712 aa7.14□□□□□ -1.27
VPS11-201ENST00000524454 ILVBLA1L0T0 632 aa7.14□□□□□ -1.27
VPS11-201ENST00000524454 TCAF2A6NFQ2 919 aa7.14□□□□□ -1.27
VPS11-201ENST00000524454 SMIM23A6NLE4 172 aa7.14□□□□□ -1.27
VPS11-201ENST00000524454 POC1B-GALNT4F8VUJ3 575 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms