RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 EPN2O95208 641 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 CLDN7O95471 211 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 CDK4P11802 303 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ETFAP13804 333 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ARSBP15848 533 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ALOX12P18054 663 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 SRD5A1P18405 259 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 CDH2P19022 906 aaPredicted RBP4.06□□□□□ -1.76
SKP1-212ENST00000523966 CDC25AP30304 524 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 MLH1P40692 756 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 RGS2P41220 211 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ZP1P60852 638 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 PPATQ06203 517 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 FAM27E3Q08E93 113 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 CSTF3Q12996 717 aaKnown RBP4.06□□□□□ -1.76
SKP1-212ENST00000523966 OLIG2Q13516 323 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 KLF9Q13886 244 aaPredicted RBP4.06□□□□□ -1.76
SKP1-212ENST00000523966 DRAP1Q14919 205 aaPredicted RBP4.06□□□□□ -1.76
SKP1-212ENST00000523966 HSPB2Q16082 182 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ETFDHQ16134 617 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 CCDC142Q17RM4 750 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ZSCAN23Q3MJ62 389 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ESCO2Q56NI9 601 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 RILPL1Q5EBL4 403 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 SPATA1Q5VX52 437 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ZKSCAN2Q63HK3 967 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 NUGGCQ68CJ6 796 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 TTI2Q6NXR4 508 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 CFAP161Q6P656 301 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 NCEH1Q6PIU2 408 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 SARM1Q6SZW1 724 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 SFTPA2Q8IWL1 248 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 MB21D2Q8IYB1 491 aaPredicted RBP4.06□□□□□ -1.76
SKP1-212ENST00000523966 PARP16Q8N5Y8 322 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 TEX45Q8NA69 505 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 C7orf57Q8NEG2 295 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ZNF548Q8NEK5 533 aaPredicted RBP4.06□□□□□ -1.76
SKP1-212ENST00000523966 TMEM163Q8TC26 289 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 IGFBPL1Q8WX77 278 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 PSPC1Q8WXF1 523 aaKnown RBP4.06□□□□□ -1.76
SKP1-212ENST00000523966 HMCESQ96FZ2 354 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 HARBI1Q96MB7 349 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ITPAQ9BY32 194 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 SPRTNQ9H040 489 aaPredicted RBP4.06□□□□□ -1.76
SKP1-212ENST00000523966 HIF1ANQ9NWT6 349 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 ELOVL5Q9NYP7 299 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 IL36RNQ9UBH0 155 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 VPS28Q9UK41 221 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 CAPN7Q9Y6W3 813 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 A3GALT2U3KPV4 340 aa4.06□□□□□ -1.76
SKP1-212ENST00000523966 A6NCN8 305 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 LIPT2A6NK58 231 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 NPIPB11E5RHQ5 1161 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 H3BNX3 289 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 K7ENM7 598 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 VWA5AO00534 786 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 TGFB1I1O43294 461 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 LIASO43766 372 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 PTP4A3O75365 173 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 NDUFS3O75489 264 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 SLC25A12O75746 678 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 GFPT2O94808 682 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 NDUFB4O95168 129 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 TMEM11P17152 192 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 EDN2P20800 178 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 FBLP22087 321 aaKnown RBP4.05□□□□□ -1.76
SKP1-212ENST00000523966 ICAM3P32942 547 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 PBX3P40426 434 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 PIP4K2AP48426 406 aaPredicted RBP4.05□□□□□ -1.76
SKP1-212ENST00000523966 P2RX3P56373 397 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 SORDQ00796 357 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 SRSF1Q07955 248 aaKnown RBP eCLIP4.05□□□□□ -1.76
SKP1-212ENST00000523966 ST3GAL1Q11201 340 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 FGFBP1Q14512 234 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 DUSP6Q16828 381 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 SOWAHAQ2M3V2 549 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 COL28A1Q2UY09 1125 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 FSCBQ5H9T9 825 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 DNTTIP2Q5QJE6 756 aaKnown RBP4.05□□□□□ -1.76
SKP1-212ENST00000523966 KLHL35Q6PF15 583 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 CYP20A1Q6UW02 462 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 LCTLQ6UWM7 567 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 TRILQ7L0X0 811 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 CTU1Q7Z7A3 348 aaKnown RBP4.05□□□□□ -1.76
SKP1-212ENST00000523966 TTC39CQ8N584 583 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 SCCPDHQ8NBX0 429 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 ENGASEQ8NFI3 743 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 CMTM3Q96MX0 182 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 STRA6Q9BX79 667 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 CCDC68Q9H2F9 335 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 CYSLTR2Q9NS75 346 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 ERVK-11Q9UQG0 969 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 SQORQ9Y6N5 450 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 DCAF1Q9Y4B6 1507 aa4.05□□□□□ -1.76
SKP1-212ENST00000523966 DNAJC9-AS1A6NH13 148 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 DOK2O60496 412 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 PAGE4O60829 102 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 LDHCP07864 332 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 MMP2P08253 660 aa4.04□□□□□ -1.76
SKP1-212ENST00000523966 RARGP13631 454 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 3188.9 ms