RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 ARMC12Q5T9G4 340 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 IQCHQ86VS3 1027 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 ZSWIM9Q86XI8 627 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 MINDY1Q8N5J2 469 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 MFSD2AQ8NA29 543 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 PDCD6IPQ8WUM4 868 aaKnown RBP12.62□□□□□ -0.39
CCNC-216ENST00000523961 PDLIM2Q96JY6 352 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 RTKNQ9BST9 563 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 C1QTNF2Q9BXJ5 285 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 SEPT10Q9P0V9 454 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 GGT7Q9UJ14 662 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 ANKRD6Q9Y2G4 727 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 CEP250Q9BV73 2442 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 TRPM6Q9BX84 2022 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 A0A1W2PR77 199 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 WNT9AO14904 365 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 TM7SF2O76062 418 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 CER1O95813 267 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 PAK4O96013 591 aaPredicted RBP12.61□□□□□ -0.39
CCNC-216ENST00000523961 CPP00450 1065 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 ITIH2P19823 946 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 CA4P22748 312 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 MMP12P39900 470 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 FAM193AP78312 1265 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 BNC1Q01954 994 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 TRAF2Q12933 501 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 ZBTB17Q13105 803 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 XRCC4Q13426 336 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 FGL2Q14314 439 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 PUM1Q14671 1186 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCNC-216ENST00000523961 GSE1Q14687 1217 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 NOMO1Q15155 1222 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 KIF19Q2TAC6 998 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 TEX44Q53QW1 395 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 LAYNQ6UX15 382 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 ZC3H18Q86VM9 953 aaKnown RBP12.61□□□□□ -0.39
CCNC-216ENST00000523961 CNTD1Q8N815 330 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 TMEM145Q8NBT3 493 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 ARRDC2Q8TBH0 407 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 FAM174AQ8TBP5 190 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 HAUS1Q96CS2 278 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 RMDN1Q96DB5 314 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 LENG8Q96PV6 779 aaPredicted RBP12.61□□□□□ -0.39
CCNC-216ENST00000523961 C1QTNF7Q9BXJ2 289 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 DLL3Q9NYJ7 618 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 PHTF1Q9UMS5 762 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 PCDHB9Q9Y5E1 797 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 RAI2Q9Y5P3 530 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 HS3ST3A1Q9Y663 406 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 PCDH15Q96QU1 1955 aa12.61□□□□□ -0.39
CCNC-216ENST00000523961 CFAP69A5D8W1 941 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 GOLGA6L9A6NEM1 432 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 H7C0C1 242 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 TLR4O00206 839 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 DFNA5O60443 496 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 MMP20O60882 483 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 OPHN1O60890 802 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 PGLSO95336 258 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 WNT1P04628 370 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 CTSKP43235 329 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 ID4P47928 161 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 ATP5OP48047 213 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 NIPAL4Q0D2K0 466 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 ZNF211Q13398 564 aaPredicted RBP12.6□□□□□ -0.39
CCNC-216ENST00000523961 HLA-BQ31612 363 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 UAP1L1Q3KQV9 507 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 AADACL2Q6P093 401 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 B4GALNT4Q76KP1 1039 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 DPPA4Q7L190 304 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 NDUFAF2Q8N183 169 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCNC-216ENST00000523961 TTC13Q8NBP0 860 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 DENND6BQ8NEG7 585 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 TRIM58Q8NG06 486 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 ACTL9Q8TC94 416 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 KLHDC7BQ96G42 594 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 AGAP3Q96P47 875 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 QKIQ96PU8 341 aaKnown RBP eCLIP12.6□□□□□ -0.392e-11■■■■■ 33.6
CCNC-216ENST00000523961 VAT1Q99536 393 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 MYOCQ99972 504 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 FERMT1Q9BQL6 677 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 WRAP53Q9BUR4 548 aaKnown RBP12.6□□□□□ -0.39
CCNC-216ENST00000523961 GAREM1Q9H706 876 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 FZD3Q9NPG1 666 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 DNAAF2Q9NVR5 837 aaKnown RBP12.6□□□□□ -0.39
CCNC-216ENST00000523961 SNX11Q9Y5W9 270 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 KNL1Q8NG31 2342 aa12.6□□□□□ -0.39
CCNC-216ENST00000523961 PLXNA2O75051 1894 aa12.59□□□□□ -0.39
CCNC-216ENST00000523961 FPGTO14772 594 aa12.59□□□□□ -0.39
CCNC-216ENST00000523961 FZD6O60353 706 aa12.59□□□□□ -0.39
CCNC-216ENST00000523961 ZNF189O75820 626 aaPredicted RBP12.59□□□□□ -0.39
CCNC-216ENST00000523961 PRKCGP05129 697 aa12.59□□□□□ -0.39
CCNC-216ENST00000523961 ZNF883P0CG24 379 aa12.59□□□□□ -0.39
CCNC-216ENST00000523961 CYP2A6P11509 494 aaPredicted RBP12.59□□□□□ -0.39
CCNC-216ENST00000523961 C6P13671 934 aa12.59□□□□□ -0.39
CCNC-216ENST00000523961 PTPN3P26045 913 aa12.59□□□□□ -0.39
CCNC-216ENST00000523961 CD86P42081 329 aa12.59□□□□□ -0.39
CCNC-216ENST00000523961 LIG3P49916 1009 aa12.59□□□□□ -0.39
CCNC-216ENST00000523961 EPHB1P54762 984 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms