RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 UNC5AQ6ZN44 842 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 RALGPS2Q86X27 583 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 SIX5Q8N196 739 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 RPLP0P6Q8NHW5 317 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 OR8D1Q8WZ84 308 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 SUDS3Q9H7L9 328 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 CASS4Q9NQ75 786 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 C20orf96Q9NUD7 363 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 TEX264Q9Y6I9 313 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 FAM169AQ9Y6X4 670 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 TIMM44O43615 452 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 FGF1P05230 155 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 SRPRAP08240 638 aaKnown RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 HOXB2P14652 356 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 HLA-DPA1P20036 260 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 SAT1P21673 171 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 HSP90AA5PQ58FG0 334 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 RNF43Q68DV7 783 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 DENND5AQ6IQ26 1287 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 TRMT10CQ7L0Y3 403 aaKnown RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 PTAR1Q7Z6K3 402 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 FAM124AQ86V42 546 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 EIF1ADQ8N9N8 165 aaKnown RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 EPS8L3Q8TE67 593 aaKnown RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 FRS2Q8WU20 508 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 FATE1Q969F0 183 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 FEM1CQ96JP0 617 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 FRMD8Q9BZ67 464 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 FAM129AQ9BZQ8 928 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 FOXP3Q9BZS1 431 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 TXNDC16Q9P2K2 825 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 SARDHQ9UL12 918 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 SPO11Q9Y5K1 396 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.4□□□□□ -0.91
SDCBP-212ENST00000523483 TCRBV9S1A1TA0A576 114 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 K7EQS6 105 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 SUN1O94901 812 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 CTSLP07711 333 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 ATXN1LP0C7T5 689 aaKnown RBP9.4□□□□□ -0.91
SDCBP-212ENST00000523483 MAPK8P45983 427 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 HSP90B2PQ58FF3 399 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 ALS2CLQ60I27 953 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 FBXL19Q6PCT2 694 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 Q6ZS52 159 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 ADHFE1Q8IWW8 467 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 OR13C4Q8NGS5 318 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 PIP4K2CQ8TBX8 421 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 EZH1Q92800 747 aaPredicted RBP9.4□□□□□ -0.91
SDCBP-212ENST00000523483 FOXQ1Q9C009 403 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 CTNNAL1Q9UBT7 734 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 MUTYHQ9UIF7 546 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 ITM2BQ9Y287 266 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 TICRRQ7Z2Z1 1910 aa9.4□□□□□ -0.91
SDCBP-212ENST00000523483 EDDM13A0A1B0GTR0 161 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 OR51F1A6NGY5 319 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 PGLSO95336 258 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 PRLP01236 227 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 MLNP12872 115 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 ADRA1AP35348 466 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 MAGEA6P43360 314 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 GPX6P59796 221 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 ZP2Q05996 745 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 CRYMQ14894 314 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 KBTBD12Q3ZCT8 623 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 FSTL4Q6MZW2 842 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 LYSMD3Q7Z3D4 306 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 TSPAN33Q86UF1 283 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 ZSWIM9Q86XI8 627 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 DNAJC1Q96KC8 554 aaKnown RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 TTC25Q96NG3 672 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 CCDC77Q9BR77 488 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 WRAP53Q9BUR4 548 aaKnown RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 CEP44Q9C0F1 390 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 ABCG8Q9H221 673 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 C8orf33Q9H7E9 229 aaPredicted RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 ARHGEF3Q9NR81 526 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 ZFATQ9P243 1243 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 NUMA1Q14980 2115 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 STX7O15400 261 aaKnown RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 PGAM1P18669 254 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 CES1P23141 567 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 EIF2DP41214 584 aaKnown RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 NPY2RP49146 381 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 ELAVL3Q14576 367 aaKnown RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 QPCTQ16769 361 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 PCID2Q5JVF3 399 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 KIAA1211LQ6NV74 962 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 KIAA1324Q6UXG2 1013 aaKnown RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 LDB1Q86U70 411 aaPredicted RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 PHTF2Q8N3S3 785 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 KIAA1958Q8N8K9 716 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 OR4K2Q8NGD2 314 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 FCRL3Q96P31 734 aaPredicted RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 ACBD3Q9H3P7 528 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 THAP10Q9P2Z0 257 aaPredicted RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 CD84Q9UIB8 345 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 SORCS3Q9UPU3 1222 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 WASF2Q9Y6W5 498 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 COL4A3Q01955 1670 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 MIA3Q5JRA6 1907 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms