RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 CATSPERBQ9H7T0 1116 aa6.23□□□□□ -1.41
CPNE3-206ENST00000523469 NCKIPSDQ9NZQ3 722 aa6.23□□□□□ -1.41
CPNE3-206ENST00000523469 HCN3Q9P1Z3 774 aa6.23□□□□□ -1.41
CPNE3-206ENST00000523469 TNS3Q68CZ2 1445 aa6.23□□□□□ -1.41
CPNE3-206ENST00000523469 SBF2Q86WG5 1849 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 TTC3P53804 2025 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 RGPD8O14715 1765 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-206ENST00000523469 ARHGAP10A1A4S6 786 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 RFX2P48378 723 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 PGGT1BP53609 377 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 TDGQ13569 410 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 BAK1Q16611 211 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 SLC22A25Q6T423 547 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 MMS22LQ6ZRQ5 1243 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 Q6ZTK2 550 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 RBFAQ8N0V3 343 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 RASSF8Q8NHQ8 419 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 GDPD5Q8WTR4 605 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 ZBTB9Q96C00 473 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 ZBTB10Q96DT7 871 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 URB1-AS1Q96HZ7 61 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 PLAC1Q9HBJ0 212 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 PPP1R14DQ9NXH3 145 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 IL1RAPL1Q9NZN1 696 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 SLC25A10Q9UBX3 287 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-206ENST00000523469 E9PCH4 1651 aa6.22□□□□□ -1.41
CPNE3-206ENST00000523469 TOPAZ1Q8N9V7 1692 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 PABPN1LA6NDY0 278 aaKnown RBP6.21□□□□□ -1.42
CPNE3-206ENST00000523469 MS4A18H0YCH9 400 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 TNFRSF13BO14836 293 aaPredicted RBP6.21□□□□□ -1.42
CPNE3-206ENST00000523469 AGR2O95994 175 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 CTPS1P17812 591 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 KCNJ4P48050 445 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 YWHAZP63104 245 aaKnown RBP6.21□□□□□ -1.42
CPNE3-206ENST00000523469 RPP30P78346 268 aaKnown RBP6.21□□□□□ -1.42
CPNE3-206ENST00000523469 GALNT2Q10471 571 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 OTUD1Q5VV17 481 aaPredicted RBP6.21□□□□□ -1.42
CPNE3-206ENST00000523469 CADM3Q8N126 398 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 TEX45Q8NA69 505 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 MCPH1Q8NEM0 835 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 TMEM18Q96B42 140 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 APOPT1Q96IL0 206 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 GFM1Q96RP9 751 aaKnown RBP6.21□□□□□ -1.42
CPNE3-206ENST00000523469 LHPPQ9H008 270 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 PEMTQ9UBM1 199 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 PCDHGB5Q9Y5G0 923 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 RAI2Q9Y5P3 530 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 MYOM3Q5VTT5 1437 aa6.21□□□□□ -1.42
CPNE3-206ENST00000523469 MAP3K5Q99683 1374 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 FMN2Q9NZ56 1722 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 RRBP1Q9P2E9 1410 aaKnown RBP6.2□□□□□ -1.42
CPNE3-206ENST00000523469 SLC25A17O43808 307 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 URODP06132 367 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 TUBP50607 506 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 LINC00205P59089 165 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 ROR2Q01974 943 aaKnown RBP6.2□□□□□ -1.42
CPNE3-206ENST00000523469 ZNF667Q5HYK9 610 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 ATG9BQ674R7 924 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 PALB2Q86YC2 1186 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 PELI3Q8N2H9 469 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 TBC1D22AQ8WUA7 517 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 ST8SIA4Q92187 359 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 RNF183Q96D59 192 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 RNF125Q96EQ8 232 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 EIF2AK1Q9BQI3 630 aaKnown RBP6.2□□□□□ -1.42
CPNE3-206ENST00000523469 MVB12BQ9H7P6 319 aa6.2□□□□□ -1.42
CPNE3-206ENST00000523469 SPATS2LQ9NUQ6 558 aaKnown RBP6.2□□□□□ -1.42
CPNE3-206ENST00000523469 SRPRBQ9Y5M8 271 aaKnown RBP6.2□□□□□ -1.42
CPNE3-206ENST00000523469 IFT172Q9UG01 1749 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 HFM1A2PYH4 1435 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 BECN2A8MW95 431 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 I6L893 689 aaPredicted RBP6.19□□□□□ -1.42
CPNE3-206ENST00000523469 EBAG9O00559 213 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 TNPO2O14787 897 aaKnown RBP6.19□□□□□ -1.42
CPNE3-206ENST00000523469 TSPAN4O14817 238 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 SPRY3O43610 288 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 LCATP04180 440 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 GNLYP22749 145 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 CDC25AP30304 524 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 TTKP33981 857 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 LIFRP42702 1097 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 EFNB1P98172 346 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 CYP4A11Q02928 519 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 TRAF1Q13077 416 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 PLEKHO1Q53GL0 409 aaPredicted RBP6.19□□□□□ -1.42
CPNE3-206ENST00000523469 DNTTIP2Q5QJE6 756 aaKnown RBP6.19□□□□□ -1.42
CPNE3-206ENST00000523469 INTS11Q5TA45 600 aaKnown RBP6.19□□□□□ -1.42
CPNE3-206ENST00000523469 LRCH2Q5VUJ6 765 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 ZNF549Q6P9A3 640 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 C9orf47Q6ZRZ4 202 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 MOB3CQ70IA8 216 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 PATL1Q86TB9 770 aaKnown RBP6.19□□□□□ -1.42
CPNE3-206ENST00000523469 FAM160B2Q86V87 743 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 HEATR4Q86WZ0 1026 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 ASB5Q8WWX0 329 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 APOLD1Q96LR9 279 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 SF3B5Q9BWJ5 86 aaKnown RBP6.19□□□□□ -1.42
CPNE3-206ENST00000523469 TTYH1Q9H313 450 aaPredicted RBP6.19□□□□□ -1.42
CPNE3-206ENST00000523469 UBN1Q9NPG3 1134 aa6.19□□□□□ -1.42
CPNE3-206ENST00000523469 HIF1ANQ9NWT6 349 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms