RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 ZNF597Q96LX8 424 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 FOPNLQ96NB1 174 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 IL12RB2Q99665 862 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 UNC93B1Q9H1C4 597 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 TM9SF3Q9HD45 589 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 CCDC59Q9P031 241 aaKnown RBP8.35□□□□□ -1.07
HMGB4-204ENST00000522796 POMPQ9Y244 141 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 EFCAB10A6NFE3 127 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 ACSL3O95573 720 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 TTC4O95801 387 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 IL1BP01584 269 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 QDPRP09417 244 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 PRG2P13727 222 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 GJA1P17302 382 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 CCND2P30279 289 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 HNMTP50135 292 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 GRB10Q13322 594 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 CAPRIN1Q14444 709 aaKnown RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 ZBTB37Q5TC79 503 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 TMEM81Q6P7N7 255 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 XKRXQ6PP77 449 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 C5orf46Q6UWT4 87 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 HEATR3Q7Z4Q2 680 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 TRABD2AQ86V40 505 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 KIF18BQ86Y91 864 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 SEPT12Q8IYM1 358 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 MFSD4AQ8N468 514 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 OR8K5Q8NH50 307 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 HEXDCQ8WVB3 486 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 KCTD13Q8WZ19 329 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 HTRA1Q92743 480 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 BBS4Q96RK4 519 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 BBS2Q9BXC9 721 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 ANKRD60Q9BZ19 345 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 GPR61Q9BZJ8 451 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 NAA50Q9GZZ1 169 aaKnown RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 CRTAC1Q9NQ79 661 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 MTMR4Q9NYA4 1195 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 ARMCX1Q9P291 453 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 PCDH10Q9P2E7 1040 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 PCDHA3Q9Y5H8 950 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 PSAT1Q9Y617 370 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 AP1M2Q9Y6Q5 423 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 MINK1Q8N4C8 1332 aaPredicted RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 ARHGAP23Q9P227 1491 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 LOC100653049A0A140TA62 436 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 E2F8A0AVK6 867 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 PDZK1P1A8MUH7 402 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 KRT34O76011 436 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 MYCLP12524 364 aaPredicted RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 PDHA2P29803 388 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 SSTR3P32745 418 aaPredicted RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 CYP2C18P33260 490 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 PTGIRP43119 386 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 P2RY4P51582 365 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 NKX3-2P78367 333 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 PTPN11Q06124 597 aaPredicted RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 ILF2Q12905 390 aaKnown RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 ZNF267Q14586 743 aaPredicted RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 ZNF273Q14593 569 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 KCNAB1Q14722 419 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 TMEM132BQ14DG7 1078 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 PCBP1Q15365 356 aaKnown RBP eCLIP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 SLC18A3Q16572 532 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 RTN1Q16799 776 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 ZMAT1Q5H9K5 638 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 SCYL2Q6P3W7 929 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 MEX3BQ6ZN04 569 aaKnown RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 ENOSF1Q7L5Y1 443 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 AACSQ86V21 672 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 AMIGO1Q86WK6 493 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 DSELQ8IZU8 1212 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 C10orf53Q8N6V4 93 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 EFHBQ8N7U6 833 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 GTF3AQ92664 365 aaKnown RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 RNF34Q969K3 372 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 TRIM56Q9BRZ2 755 aaKnown RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 TMEM121Q9BTD3 319 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 SAV1Q9H4B6 383 aaPredicted RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 CCDC86Q9H6F5 360 aaKnown RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 FBXO8Q9NRD0 319 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 GMPR2Q9P2T1 348 aaKnown RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 NXF1Q9UBU9 619 aaKnown RBP8.34□□□□□ -1.07
HMGB4-204ENST00000522796 GGA1Q9UJY5 639 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 DENND2AQ9ULE3 1009 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 SLC6A14Q9UN76 642 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 PLLPQ9Y342 182 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 CCDC61Q9Y6R9 512 aa8.34□□□□□ -1.07
HMGB4-204ENST00000522796 MROH1Q8NDA8 1641 aa8.34□□□□□ -1.08
HMGB4-204ENST00000522796 ADAMTS13Q76LX8 1427 aa8.34□□□□□ -1.08
HMGB4-204ENST00000522796 NT5C1B-RDH14C9J2C7 533 aa8.33□□□□□ -1.08
HMGB4-204ENST00000522796 USP17L13C9JLJ4 530 aa8.33□□□□□ -1.08
HMGB4-204ENST00000522796 USP17L17D6RBQ6 530 aa8.33□□□□□ -1.08
HMGB4-204ENST00000522796 PRKD3O94806 890 aa8.33□□□□□ -1.08
HMGB4-204ENST00000522796 KLHL18O94889 574 aa8.33□□□□□ -1.08
HMGB4-204ENST00000522796 HSPA4LO95757 839 aa8.33□□□□□ -1.08
HMGB4-204ENST00000522796 DLGAP3O95886 979 aa8.33□□□□□ -1.08
HMGB4-204ENST00000522796 DHFRP00374 187 aa8.33□□□□□ -1.08
HMGB4-204ENST00000522796 SERPING1P05155 500 aa8.33□□□□□ -1.08
HMGB4-204ENST00000522796 CLUP10909 449 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms