RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 CHMP2BQ9UQN3 213 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 MRPS17Q9Y2R5 130 aaKnown RBP13.47□□□□□ -0.25
CLK4-210ENST00000522136 MAD1L1Q9Y6D9 718 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 CCDC78A2IDD5 438 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 CCDC151A5D8V7 595 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 SDR42E2A6NKP2 422 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 ANKRD66B4E2M5 251 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 CPP00450 1065 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 PRNPP04156 253 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 FGF1P05230 155 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 MAGEA4P43358 317 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 PSMD8P48556 350 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 GAS6Q14393 721 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 ZNF805Q5CZA5 627 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 TJAP1Q5JTD0 557 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 CFAP58Q5T655 872 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 FBXO38Q6PIJ6 1188 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 TMEM92Q6UXU6 159 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 TRMT11Q7Z4G4 463 aaKnown RBP13.47□□□□□ -0.25
CLK4-210ENST00000522136 TMC3Q7Z5M5 1100 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 FBXO36Q8NEA4 188 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 TMIEQ8NEW7 156 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 FLCNQ8NFG4 579 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLK4-210ENST00000522136 ARRDC3Q96B67 414 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 TXLNGYQ9BZA5 131 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 CD248Q9HCU0 757 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 C2orf42Q9NWW7 574 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 BFARQ9NZS9 450 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 SPO11Q9Y5K1 396 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 TEX264Q9Y6I9 313 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 A8MX80 341 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 ALOX15BO15296 676 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 H2AFXP16104 143 aaPredicted RBP13.46□□□□□ -0.25
CLK4-210ENST00000522136 ABL2P42684 1182 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 NPY2RP49146 381 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 COPAP53621 1224 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 SATB1Q01826 763 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 DNAJC21Q5F1R6 531 aaKnown RBP13.46□□□□□ -0.25
CLK4-210ENST00000522136 CASC4Q6P4E1 433 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 CES3Q6UWW8 571 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 CAPN12Q6ZSI9 719 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 BLOC1S5Q8TDH9 187 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 LRIG1Q96JA1 1093 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 OSBPL1AQ9BXW6 950 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 MKRN2Q9H000 416 aaKnown RBP13.46□□□□□ -0.25
CLK4-210ENST00000522136 RSPH9Q9H1X1 276 aaPredicted RBP13.46□□□□□ -0.25
CLK4-210ENST00000522136 SEMA4AQ9H3S1 761 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 MMP17Q9ULZ9 603 aa13.46□□□□□ -0.25
CLK4-210ENST00000522136 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.46□□□□□ -0.25
CLK4-210ENST00000522136 C16orf96A6NNT2 1141 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 AURKAO14965 403 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 BUD23O43709 281 aaKnown RBP13.45□□□□□ -0.26
CLK4-210ENST00000522136 TIMP2P16035 220 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 SEPT6Q14141 434 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 STARD3Q14849 445 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 KYNUQ16719 465 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 EOGTQ5NDL2 527 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 EMBQ6PCB8 327 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 TRIM67Q6ZTA4 783 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 PARS2Q7L3T8 475 aaKnown RBP13.45□□□□□ -0.26
CLK4-210ENST00000522136 MDGA1Q8NFP4 955 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 OR2T3Q8NH03 318 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 ZNF778Q96MU6 729 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 CDC42EP4Q9H3Q1 356 aaKnown RBP13.45□□□□□ -0.26
CLK4-210ENST00000522136 CHRAC1Q9NRG0 131 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 KCTD3Q9Y597 815 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 VCANP13611 3396 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 MID1O15344 667 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 EIF3HO15372 352 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLK4-210ENST00000522136 ERLIN1O75477 346 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 PDGFBP01127 241 aaPredicted RBP13.45□□□□□ -0.26
CLK4-210ENST00000522136 ALADP13716 330 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 HNF1BP35680 557 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 PMS2P54278 862 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 RPS14P62263 151 aaKnown RBP13.45□□□□□ -0.26
CLK4-210ENST00000522136 LRRC32Q14392 662 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 CST6Q15828 149 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 UGP2Q16851 508 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 MAP9Q49MG5 647 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 BEND6Q5SZJ8 279 aaPredicted RBP13.45□□□□□ -0.26
CLK4-210ENST00000522136 BRAT1Q6PJG6 821 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 MICALCLQ6ZW33 695 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 DSG4Q86SJ6 1040 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 TTC7BQ86TV6 843 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 PYROXD1Q8WU10 500 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 CAVIN3Q969G5 261 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 CFAP36Q96G28 342 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 UHRF1Q96T88 793 aaPredicted RBP13.45□□□□□ -0.26
CLK4-210ENST00000522136 NELL2Q99435 816 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 EBNA1BP2Q99848 306 aaKnown RBP13.45□□□□□ -0.26
CLK4-210ENST00000522136 IL22Q9GZX6 179 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 TSPYL1Q9H0U9 437 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 PLAC1Q9HBJ0 212 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 NINJ2Q9NZG7 142 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 PHTF1Q9UMS5 762 aa13.45□□□□□ -0.26
CLK4-210ENST00000522136 NCOR1O75376 2440 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 A0A0J9YYE9 177 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 TSPAN11A1L157 253 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 AP3B1O00203 1094 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms