RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 POLBP06746 335 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 CTSLP07711 333 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 BMP1P13497 986 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 TSHRP16473 764 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 CD72P21854 359 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 ADRA1DP25100 572 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 PHBP35232 272 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 RPL26P61254 145 aaKnown RBP21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 MSLNQ13421 630 aaPredicted RBP21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 MLF2Q15773 248 aaPredicted RBP21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 SDE2Q6IQ49 451 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 PKN3Q6P5Z2 889 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 PIH1D2Q8WWB5 315 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 LRIG1Q96JA1 1093 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 SMIM14Q96QK8 99 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 OSBPL1AQ9BXW6 950 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 CA14Q9ULX7 337 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 RPL26L1Q9UNX3 145 aaKnown RBP21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 TCAF1Q9Y4C2 921 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 RPS6KL1Q9Y6S9 549 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 A0A087WUV0 522 aaPredicted RBP21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 HEATR9A2RTY3 570 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 CTPS1P17812 591 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 ABL2P42684 1182 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 GRIA4P48058 902 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 FAM193AP78312 1265 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 ENPP2Q13822 863 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 ELAVL3Q14576 367 aaKnown RBP21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 ALS2CLQ60I27 953 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 ZSWIM9Q86XI8 627 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 OR2W6PQ8NHA6 318 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 KCNV2Q8TDN2 545 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 ECHDC3Q96DC8 303 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 KIFC1Q9BW19 673 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 PRSS16Q9NQE7 514 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 SPO11Q9Y5K1 396 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 FAM237BA0A1B0GVD1 139 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 C19orf67A6NJJ6 358 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 SHISA7A6NL88 538 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 TNFRSF10AO00220 468 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 MAN2B1O00754 1011 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 MAP2K7O14733 419 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 SPAG6O75602 509 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 SASH3O75995 380 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 PRNPP04156 253 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 SHBGP04278 402 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 ABHD2P08910 425 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 GSTA2P09210 222 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 IFFO1Q0D2I5 559 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 PTPRRQ15256 657 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 POM121L1PQ3SYA9 428 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 ANKRD20A4Q4UJ75 823 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 IQCKQ8N0W5 287 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 FBF1Q8TES7 1133 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 PTCD2Q8WV60 388 aaKnown RBP21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 ZNF669Q96BR6 464 aaPredicted RBP21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 ZIM3Q96PE6 472 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 RANBP9Q96S59 729 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 FAM129BQ96TA1 746 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 VIPAS39Q9H9C1 493 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 PLAC1Q9HBJ0 212 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 PHTF1Q9UMS5 762 aa21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 NDRG2Q9UN36 371 aaKnown RBP21.49■■□□□ 1.03
R3HCC1-208ENST00000522012 COL4A2P08572 1712 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 A0A1W2PQ67 120 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 SYNCRIPO60506 623 aaKnown RBP21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 KLF8O95600 359 aaPredicted RBP21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 ALPIP09923 528 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 NMBRP28336 390 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 NTSR1P30989 418 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 CRYMQ14894 314 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 SPANXN3Q5MJ09 141 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 STEAP4Q687X5 459 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 ZNF852Q6ZMS4 543 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 TMEM135Q86UB9 458 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 NDUFAF2Q8N183 169 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 GSDMBQ8TAX9 411 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 BRSK1Q8TDC3 778 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 MFSD3Q96ES6 412 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 ZNF778Q96MU6 729 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 FCRL3Q96P31 734 aaPredicted RBP21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 MRM3Q9HC36 420 aaKnown RBP21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 FBXL21Q9UKT6 434 aa21.48■■□□□ 1.03
R3HCC1-208ENST00000522012 KPNA3O00505 521 aaPredicted RBP21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 ATP8B1O43520 1251 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 USP1O94782 785 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 NUDT17P0C025 328 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 POLR2LP62875 67 aaKnown RBP21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 LAMB3Q13751 1172 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 ZNF805Q5CZA5 627 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 BRAT1Q6PJG6 821 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 GLT6D1Q7Z4J2 308 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 DSG4Q86SJ6 1040 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 IL17RCQ8NAC3 791 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 TMIEQ8NEW7 156 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 ASB2Q96Q27 587 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 ARHGEF3Q9NR81 526 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 SARDHQ9UL12 918 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 PPM1HQ9ULR3 514 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms