RNA–Protein interactions for RNA: ENST00000521985.1

PTK2-237, Transcript of protein tyrosine kinase 2, human

TSL 3

Gene PTK2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-237	ENST00000521985	APOBEC3B	Q9UH17	382 aa	Known RBP	11.17	□□□□□ -0.62
PTK2-237	ENST00000521985	ATP8A1	Q9Y2Q0	1164 aa		11.17	□□□□□ -0.62
PTK2-237	ENST00000521985	TMEM131	Q92545	1883 aa		11.17	□□□□□ -0.62
PTK2-237	ENST00000521985	TTC24	A2A3L6	582 aa	Predicted RBP	11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	LMO7DN	F2Z398	122 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985		H3BRJ5	948 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	TLX3	O43711	291 aa	Predicted RBP	11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	BRINP1	O60477	761 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	PEX11B	O96011	259 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	CYP1A2	P05177	515 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	TSHR	P16473	764 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	TGM2	P21980	687 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	MMP12	P39900	470 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	ARL4A	P40617	200 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	EIF2S3	P41091	472 aa	Known RBP	11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	BLK	P51451	505 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	RENBP	P51606	427 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	HK3	P52790	923 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	NR0B2	Q15466	257 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	NFKBIB	Q15653	356 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	SMTNL2	Q2TAL5	461 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	TDRD12	Q587J7	1177 aa	Known RBP	11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	TXNRD3NB	Q6F5E7	133 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	GUSBP11	Q6P575	273 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	ENPP7	Q6UWV6	458 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	LIPI	Q6XZB0	460 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	NIPA2	Q8N8Q9	360 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	MAPK15	Q8TD08	544 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	FGF11	Q92914	225 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	TSACC	Q96A04	125 aa	Predicted RBP	11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	BTBD6	Q96KE9	485 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	ZNF599	Q96NL3	588 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	DCBLD2	Q96PD2	775 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	CSPG4P5	Q96PW8	444 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	DEPDC7	Q96QD5	511 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	LRRC61	Q9BV99	259 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	ETNK2	Q9NVF9	386 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	SEPT3	Q9UH03	358 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	IP6K2	Q9UHH9	426 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	OR1A2	Q9Y585	309 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	PCDHB1	Q9Y5F3	818 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	SPEG	Q15772	3267 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985	AKAP13	Q12802	2813 aa		11.16	□□□□□ -0.62
PTK2-237	ENST00000521985		A0A087X0T9	212 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985		A8MX80	341 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	MAFK	O60675	156 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	USP12	O75317	370 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	RECQL5	O94762	991 aa	Predicted RBP	11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	ANXA6	P08133	673 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	CELA2B	P08218	269 aa	Predicted RBP	11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	FAM228B	P0C875	321 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	IL4R	P24394	825 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	ITPKB	P27987	946 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	HTR1B	P28222	390 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	ACTN2	P35609	894 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	RPIA	P49247	311 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	SRP54	P61011	504 aa	Known RBP	11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	AP1S1	P61966	158 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	RALGDS	Q12967	914 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	NFATC4	Q14934	902 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	ALG11	Q2TAA5	492 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	PERM1	Q5SV97	790 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	C6orf132	Q5T0Z8	1188 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	TMCO4	Q5TGY1	634 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	ALKBH5	Q6P6C2	394 aa	Known RBP	11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	LVRN	Q6Q4G3	990 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	TMCO3	Q6UWJ1	677 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	NYAP1	Q6ZVC0	841 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	RD3	Q7Z3Z2	195 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	HID1	Q8IV36	788 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	PGBD5	Q8N414	524 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	FSTL5	Q8N475	847 aa	Predicted RBP	11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	PLA2G15	Q8NCC3	412 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	TPCN2	Q8NHX9	752 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	TEKT4	Q8WW24	435 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	GLMN	Q92990	594 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	IQCD	Q96DY2	449 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	NUP85	Q9BW27	656 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	PADI4	Q9UM07	663 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	LUC7L2	Q9Y383	392 aa	Known RBP	11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	PCDHGC4	Q9Y5F7	938 aa		11.15	□□□□□ -0.62
PTK2-237	ENST00000521985	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	GOLGA6L19	H0YKK7	550 aa		11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	MYO1F	O00160	1098 aa		11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	RRP8	O43159	456 aa	Known RBP	11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	HTRA2	O43464	458 aa	Predicted RBP	11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	CS	O75390	466 aa	Known RBP	11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	RASGRP1	O95267	797 aa		11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	TNF	P01375	233 aa		11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	MPO	P05164	745 aa		11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	PCCB	P05166	539 aa		11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	ALPI	P09923	528 aa		11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	CTSE	P14091	401 aa		11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	CR2	P20023	1033 aa		11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	TRIM23	P36406	574 aa		11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	LSS	P48449	732 aa		11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	SLC25A11	Q02978	314 aa	Known RBP	11.14	□□□□□ -0.63
PTK2-237	ENST00000521985	MTM1	Q13496	603 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms