RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 GRIN3AQ8TCU5 1115 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 HCAR2Q8TDS4 363 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 OSBPL1AQ9BXW6 950 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 USP29Q9HBJ7 922 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 FBXL12Q9NXK8 326 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 PCOLCE2Q9UKZ9 415 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 TTC7AQ9ULT0 858 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-222ENST00000520948 FZD4Q9ULV1 537 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 ANKRD36A6QL64 1941 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 NUMA1Q14980 2115 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 A0A1W2PP55 124 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 TTC24A2A3L6 582 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-222ENST00000520948 PLK4O00444 970 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 KPNA3O00505 521 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-222ENST00000520948 TRAFD1O14545 582 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-222ENST00000520948 FANCGO15287 622 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 MTSS1O43312 755 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 CBFA2T3O75081 653 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 CAPNS1P04632 268 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 PRLRP16471 622 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 CES1P23141 567 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 ITGB7P26010 798 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 PTPN3P26045 913 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 RBL1P28749 1068 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 ACSL1P33121 698 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 MAXP61244 160 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 AP1S1P61966 158 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 CNTN1Q12860 1018 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 HLA-BQ31612 363 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 ZNF805Q5CZA5 627 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 FAM182AQ5T1J6 154 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 PAPD7Q5XG87 772 aaKnown RBP18.31■□□□□ 0.52
VEGFA-222ENST00000520948 HTR3CQ8WXA8 447 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 TEKT5Q96M29 485 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 ZNF641Q96N77 438 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-222ENST00000520948 KLHL32Q96NJ5 620 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 OSBPL9Q96SU4 736 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 OMDQ99983 421 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 FAM118BQ9BPY3 351 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 HDAC8Q9BY41 377 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 POLR1EQ9GZS1 481 aaKnown RBP18.31■□□□□ 0.52
VEGFA-222ENST00000520948 SUV39H2Q9H5I1 410 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 C6orf106Q9H6K1 298 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-222ENST00000520948 C10orf88Q9H8K7 445 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 NOD2Q9HC29 1040 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 TM7SF3Q9NS93 570 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 DKK3Q9UBP4 350 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 SNX12Q9UMY4 172 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 APOBEC2Q9Y235 224 aaKnown RBP18.31■□□□□ 0.52
VEGFA-222ENST00000520948 NCKAP1Q9Y2A7 1128 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 ADAMTS20P59510 1910 aa18.31■□□□□ 0.52
VEGFA-222ENST00000520948 A0A1B0GVT2 93 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 TSPAN11A1L157 253 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 H7C0C1 242 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 CES2O00748 559 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 CEP104O60308 925 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 RNASEH2AO75792 299 aaKnown RBP18.3■□□□□ 0.52
VEGFA-222ENST00000520948 CER1O95813 267 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 UGT2B4P06133 528 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 ATP5OP48047 213 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 NIPAL4Q0D2K0 466 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 POM121L1PQ3SYA9 428 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 PIP5KL1Q5T9C9 394 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 AGBL4Q5VU57 503 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 C19orf48Q6RUI8 117 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-222ENST00000520948 CAMK1DQ8IU85 385 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 COG1Q8WTW3 980 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 SPOCK2Q92563 424 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 ECHDC3Q96DC8 303 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 VAT1Q99536 393 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 FRMD8P1Q9BZ68 369 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-222ENST00000520948 SGK2Q9HBY8 427 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 ZKSCAN5Q9Y2L8 839 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 FREM2Q5SZK8 3169 aa18.3■□□□□ 0.52
VEGFA-222ENST00000520948 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-222ENST00000520948 C16orf96A6NNT2 1141 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 SLC7A4O43246 635 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 HTRA2O43464 458 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-222ENST00000520948 PIGNO95427 931 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 FGGP02679 453 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 MMP2P08253 660 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 CD68P34810 354 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-222ENST00000520948 CSNK1EP49674 416 aaKnown RBP18.29■□□□□ 0.52
VEGFA-222ENST00000520948 TAS2R38P59533 333 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 DSC2Q02487 901 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 CCNI2Q6ZMN8 369 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-222ENST00000520948 ERN2Q76MJ5 926 aaKnown RBP18.29■□□□□ 0.52
VEGFA-222ENST00000520948 CDKL3Q8IVW4 592 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-222ENST00000520948 C1orf216Q8TAB5 229 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 TADA1Q96BN2 335 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 PPP1R16AQ96I34 528 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 SEMA3CQ99985 751 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 CEP41Q9BYV8 373 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 BTBD1Q9H0C5 482 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 SCUBE2Q9NQ36 999 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 DNPEPQ9ULA0 475 aa18.29■□□□□ 0.52
VEGFA-222ENST00000520948 TP53BP1Q12888 1972 aaPredicted RBP18.28■□□□□ 0.52
VEGFA-222ENST00000520948 GOLGA8CPA6NN73 597 aa18.28■□□□□ 0.52
VEGFA-222ENST00000520948 PLRG1O43660 514 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms