RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.06□□□□□ -1.44
FAM49B-218ENST00000520887 MAGEH1Q9H213 219 aa6.06□□□□□ -1.44
FAM49B-218ENST00000520887 GPR160Q9UJ42 338 aa6.06□□□□□ -1.44
FAM49B-218ENST00000520887 SMG5Q9UPR3 1016 aaKnown RBP6.06□□□□□ -1.44
FAM49B-218ENST00000520887 NCKAP1Q9Y2A7 1128 aa6.06□□□□□ -1.44
FAM49B-218ENST00000520887 ZNF281Q9Y2X9 895 aa6.06□□□□□ -1.44
FAM49B-218ENST00000520887 CDH23Q9H251 3354 aa6.06□□□□□ -1.44
FAM49B-218ENST00000520887 MYO10Q9HD67 2058 aa6.06□□□□□ -1.44
FAM49B-218ENST00000520887 GOLGA6L7A0A1B0GV03 622 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 TCRBV5S1A1TA0A578 114 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ILVBLA1L0T0 632 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 FAM86C2PA6NEL3 165 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 CBX4O00257 560 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 APOL1O14791 398 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 PPP1R12AO14974 1030 aaPredicted RBP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 SMAD7O15105 426 aaKnown RBP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 BUB1O43683 1085 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 PSPNO60542 156 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ZNF217O75362 1048 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ZRANB2O95218 330 aaKnown RBP eCLIP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 KLF8O95600 359 aaPredicted RBP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 APBB3O95704 486 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 EGFP01133 1207 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 DNTTP04053 509 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 EPHX1P07099 455 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 DCNP07585 359 aaKnown RBP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 DLDP09622 509 aaKnown RBP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 KRT10P13645 584 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 CD72P21854 359 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 XPAP23025 273 aaPredicted RBP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 RPL10P27635 214 aaKnown RBP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 AVPR2P30518 371 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 SLC6A4P31645 630 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ACTN2P35609 894 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 OPRD1P41143 372 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 CSKP41240 450 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 RENBPP51606 427 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 NDST2P52849 883 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 RWDD2BP57060 319 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 PITX1P78337 314 aaPredicted RBP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ZXDBP98169 803 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ECT2LQ008S8 904 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 GNA12Q03113 381 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 SLC20A2Q08357 652 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 LMAN2Q12907 356 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ZNF235Q14590 738 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 GRM3Q14832 879 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 DPYSL2Q16555 572 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ASTE1Q2TB18 679 aaPredicted RBP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 PLEKHG6Q3KR16 790 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 C2orf27AQ580R0 203 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 PITRM1Q5JRX3 1037 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 LRRC38Q5VT99 294 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 FAM46CQ5VWP2 391 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 NADSYN1Q6IA69 706 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 RNF111Q6ZNA4 994 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 RFX8Q6ZV50 586 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 SYT13Q7L8C5 426 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ZNF605Q86T29 641 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 VSIG1Q86XK7 387 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 RFX6Q8HWS3 928 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 LRRC49Q8IUZ0 686 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 C1orf210Q8IVY1 113 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 CCDC105Q8IYK2 499 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 CFAP52Q8N1V2 620 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 RYBPQ8N488 228 aaPredicted RBP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 CAMKK1Q8N5S9 505 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 CCDC185Q8N715 623 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ATP11CQ8NB49 1132 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 KDM1BQ8NB78 822 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ACRBPQ8NEB7 543 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 GANCQ8TET4 914 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 MAIP1Q8WWC4 291 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ATRIPQ8WXE1 791 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 OR8D1Q8WZ84 308 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ARHGEF26Q96DR7 871 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 CHFRQ96EP1 664 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 PRICKLE1Q96MT3 831 aaPredicted RBP6.05□□□□□ -1.44
FAM49B-218ENST00000520887 LRRC3BQ96PB8 259 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 PACSIN1Q9BY11 444 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 EPHX3Q9H6B9 360 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 TMEM248Q9NWD8 314 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 ELOVL2Q9NXB9 296 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 FBXO4Q9UKT5 387 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 MMP17Q9ULZ9 603 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 GUCA1BQ9UMX6 200 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 SCML1Q9UN30 329 aa6.05□□□□□ -1.44
FAM49B-218ENST00000520887 KIAA1549LQ6ZVL6 1849 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 CHD9Q3L8U1 2897 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 IGLV3-10A0A075B6K4 115 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 EDDM13A0A1B0GTR0 161 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 CXorf51AA0A1B0GTR3 108 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 TCRBV21S2A2A0A5A6 115 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 GOLGA6CA6NDK9 693 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 GOLGA6BA6NDN3 693 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 ZNF487B1APH4 448 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 DFFAO00273 331 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 PJA2O43164 708 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 MTSS1O43312 755 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms